RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 PDPRQ8NCN5 879 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 C10orf82Q8WW14 230 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 TRMOQ9BU70 441 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 TPSD1Q9BZJ3 242 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 COG4Q9H9E3 785 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 PNPOQ9NVS9 261 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 HAO1Q9UJM8 370 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 DCTN4Q9UJW0 460 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 PRKAB1Q9Y478 270 aa29.82■■■□□ 2.36
CCM2-219ENST00000544363 GRID2O43424 1007 aa29.81■■■□□ 2.36
CCM2-219ENST00000544363 EEF1DP29692 281 aaKnown RBP29.81■■■□□ 2.36
CCM2-219ENST00000544363 PLOD1Q02809 727 aaPredicted RBP29.81■■■□□ 2.36
CCM2-219ENST00000544363 PRKAA1Q13131 559 aa29.81■■■□□ 2.36
CCM2-219ENST00000544363 RASGRP3Q8IV61 690 aa29.81■■■□□ 2.36
CCM2-219ENST00000544363 C1QTNF3Q9BXJ4 246 aa29.81■■■□□ 2.36
CCM2-219ENST00000544363 SLC17A4Q9Y2C5 497 aa29.81■■■□□ 2.36
CCM2-219ENST00000544363 EPB41L3Q9Y2J2 1087 aaPredicted RBP29.81■■■□□ 2.36
CCM2-219ENST00000544363 POM121BA6NF01 834 aa29.8■■■□□ 2.36
CCM2-219ENST00000544363 LRRC14BA6NHZ5 514 aa29.8■■■□□ 2.36
CCM2-219ENST00000544363 MATN4O95460 622 aa29.8■■■□□ 2.36
CCM2-219ENST00000544363 CLDN2P57739 230 aa29.8■■■□□ 2.36
CCM2-219ENST00000544363 NAA20P61599 178 aa29.8■■■□□ 2.36
CCM2-219ENST00000544363 GALNT1Q10472 559 aaPredicted RBP29.8■■■□□ 2.36
CCM2-219ENST00000544363 MTAPQ13126 283 aa29.8■■■□□ 2.36
CCM2-219ENST00000544363 PLA2G4EQ3MJ16 856 aa29.8■■■□□ 2.36
CCM2-219ENST00000544363 RPS27LQ71UM5 84 aaKnown RBP29.8■■■□□ 2.36
CCM2-219ENST00000544363 AMZ2Q86W34 360 aa29.8■■■□□ 2.36
CCM2-219ENST00000544363 WDR75Q8IWA0 830 aaKnown RBP29.8■■■□□ 2.36
CCM2-219ENST00000544363 RMI1Q9H9A7 625 aa29.8■■■□□ 2.36
CCM2-219ENST00000544363 KCNK13Q9HB14 408 aa29.8■■■□□ 2.36
CCM2-219ENST00000544363 PARVBQ9HBI1 364 aa29.8■■■□□ 2.36
CCM2-219ENST00000544363 EML4Q9HC35 981 aaKnown RBP29.8■■■□□ 2.36
CCM2-219ENST00000544363 PDE10AQ9Y233 779 aa29.8■■■□□ 2.36
CCM2-219ENST00000544363 KMOO15229 486 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 GUCA1CO95843 209 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 IGHV4-34P06331 123 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 PDHA2P29803 388 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 AKT2P31751 481 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 KIAA1024LP59773 190 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 ZXDAP98168 799 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 ZSCAN26Q16670 478 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 ANKS6Q68DC2 871 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 FOXR1Q6PIV2 292 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 XKR5Q6UX68 686 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 OXR1Q8N573 874 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 GPR174Q9BXC1 333 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 TRIM54Q9BYV2 358 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 EBF2Q9HAK2 575 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 ZNHIT2Q9UHR6 403 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 ANKRD12Q6UB98 2062 aa29.79■■■□□ 2.36
CCM2-219ENST00000544363 IGHV1OR15-9A0A0B4J2B8 117 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 H3BM21 787 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 CEACAM5P06731 702 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 RPS17P08708 135 aaKnown RBP29.78■■■□□ 2.36
CCM2-219ENST00000544363 MPSTP25325 297 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 MAPK9P45984 424 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 RPIAP49247 311 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 AGTR2P50052 363 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 ABRQ12979 859 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 FBXO48Q5FWF7 155 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 CDKL4Q5MAI5 379 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 ZNF771Q7L3S4 317 aaPredicted RBP29.78■■■□□ 2.36
CCM2-219ENST00000544363 CAMKK1Q8N5S9 505 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 RLN3Q8WXF3 142 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 BMFQ96LC9 184 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 EGFL8Q99944 293 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 PTBP2Q9UKA9 531 aaKnown RBP29.78■■■□□ 2.36
CCM2-219ENST00000544363 HS3ST3A1Q9Y663 406 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 A0A0G2JND7 137 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 FSBPO95073 299 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 DCNP07585 359 aaKnown RBP29.78■■■□□ 2.36
CCM2-219ENST00000544363 CYP2A7P20853 494 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 CCR3P51677 355 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 CDKL1Q00532 357 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 NFE2L1Q14494 772 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 SULT1C3Q6IMI6 304 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 PLCD4Q9BRC7 762 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 SIKE1Q9BRV8 207 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 SHCBP1LQ9BZQ2 653 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 SLC23A2Q9UGH3 650 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 ZDHHC2Q9UIJ5 367 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 CA5BQ9Y2D0 317 aa29.78■■■□□ 2.36
CCM2-219ENST00000544363 TNPO3Q9Y5L0 923 aaKnown RBP29.78■■■□□ 2.36
CCM2-219ENST00000544363 KLHL33A6NCF5 533 aa29.77■■■□□ 2.36
CCM2-219ENST00000544363 EBAG9O00559 213 aa29.77■■■□□ 2.36
CCM2-219ENST00000544363 PSIP1O75475 530 aaKnown RBP29.77■■■□□ 2.36
CCM2-219ENST00000544363 FUCA1P04066 466 aa29.77■■■□□ 2.36
CCM2-219ENST00000544363 RPL14P50914 215 aaKnown RBP29.77■■■□□ 2.36
CCM2-219ENST00000544363 ARFIP2P53365 341 aa29.77■■■□□ 2.36
CCM2-219ENST00000544363 PCBP2Q15366 365 aaKnown RBP eCLIP29.77■■■□□ 2.368e-6■■■■□ 24
CCM2-219ENST00000544363 FRMD1Q8N878 549 aa29.77■■■□□ 2.36
CCM2-219ENST00000544363 MCOLN3Q8TDD5 553 aa29.77■■■□□ 2.36
CCM2-219ENST00000544363 RHBDF1Q96CC6 855 aa29.77■■■□□ 2.36
CCM2-219ENST00000544363 DPEP2Q9H4A9 486 aa29.77■■■□□ 2.36
CCM2-219ENST00000544363 KCNK4Q9NYG8 393 aa29.77■■■□□ 2.36
CCM2-219ENST00000544363 USH1CQ9Y6N9 552 aa29.77■■■□□ 2.36
CCM2-219ENST00000544363 HIST1H2AGP0C0S8 130 aaPredicted RBP29.76■■■□□ 2.35
CCM2-219ENST00000544363 HIST1H2ADP20671 130 aa29.76■■■□□ 2.35
CCM2-219ENST00000544363 CDH13P55290 713 aa29.76■■■□□ 2.35
CCM2-219ENST00000544363 PFN3P60673 137 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms