RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 RAVER1Q8IY67 606 aaKnown RBP13.42□□□□□ -0.26
HCFC2-202ENST00000544223 ULK2Q8IYT8 1036 aa13.42□□□□□ -0.26
HCFC2-202ENST00000544223 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
HCFC2-202ENST00000544223 FAM156AQ8NDB6 213 aa13.42□□□□□ -0.26
HCFC2-202ENST00000544223 SPDYE1Q8NFV5 336 aaPredicted RBP13.42□□□□□ -0.26
HCFC2-202ENST00000544223 DTX3LQ8TDB6 740 aa13.42□□□□□ -0.26
HCFC2-202ENST00000544223 RHBDF1Q96CC6 855 aa13.42□□□□□ -0.26
HCFC2-202ENST00000544223 LRCH3Q96II8 777 aa13.42□□□□□ -0.26
HCFC2-202ENST00000544223 COQ10AQ96MF6 247 aa13.42□□□□□ -0.26
HCFC2-202ENST00000544223 SLC39A3Q9BRY0 314 aa13.42□□□□□ -0.26
HCFC2-202ENST00000544223 DYRK4Q9NR20 520 aa13.42□□□□□ -0.26
HCFC2-202ENST00000544223 SLC7A8Q9UHI5 535 aa13.42□□□□□ -0.26
HCFC2-202ENST00000544223 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.42□□□□□ -0.26
HCFC2-202ENST00000544223 CFAP54Q96N23 3096 aa13.42□□□□□ -0.26
HCFC2-202ENST00000544223 A0A088AWK7 358 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 AREL1O15033 823 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 GPC4O75487 556 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 PCDH8O95206 1070 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 CD9P21926 228 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 DPP6P42658 865 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 PKNOX1P55347 436 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 TAS2R38P59533 333 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 SATB1Q01826 763 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 PON2Q15165 354 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 SNCBQ16143 134 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 LYPLAL1Q5VWZ2 237 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 ERN2Q76MJ5 926 aaKnown RBP13.41□□□□□ -0.26
HCFC2-202ENST00000544223 FAM124AQ86V42 546 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 ELSPBP1Q96BH3 223 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 DTD2Q96FN9 168 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 TEX37Q96LM6 180 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 KCTD5Q9NXV2 234 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 GMPR2Q9P2T1 348 aaKnown RBP13.41□□□□□ -0.26
HCFC2-202ENST00000544223 RNF11Q9Y3C5 154 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 MTCH2Q9Y6C9 303 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 SDK1Q7Z5N4 2213 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 SLCO1B7G3V0H7 640 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 RAD51BO15315 384 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 LATO43561 262 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 EGFP01133 1207 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 PCCBP05166 539 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 ENO3P13929 434 aaPredicted RBP13.41□□□□□ -0.26
HCFC2-202ENST00000544223 HGFP14210 728 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 TCN1P20061 433 aaPredicted RBP13.41□□□□□ -0.26
HCFC2-202ENST00000544223 MAT2AP31153 395 aaKnown RBP13.41□□□□□ -0.26
HCFC2-202ENST00000544223 GRIA2P42262 883 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 HK2P52789 917 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 SESN3P58005 492 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 EIF4HQ15056 248 aaKnown RBP13.41□□□□□ -0.26
HCFC2-202ENST00000544223 PIP5KL1Q5T9C9 394 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 GPRIN3Q6ZVF9 776 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 TRAPPC5Q8IUR0 188 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 TRAM1L1Q8N609 369 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 CMTM5Q96DZ9 223 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 NUS1Q96E22 293 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 PDLIM5Q96HC4 596 aaKnown RBP13.41□□□□□ -0.26
HCFC2-202ENST00000544223 ZSCAN5AQ9BUG6 496 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 IL1RL2Q9HB29 575 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 PTBP2Q9UKA9 531 aaKnown RBP13.41□□□□□ -0.26
HCFC2-202ENST00000544223 OARD1Q9Y530 152 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 OR1A2Q9Y585 309 aa13.41□□□□□ -0.26
HCFC2-202ENST00000544223 A0A1W2PQ67 120 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 RNASEH2AO75792 299 aaKnown RBP13.4□□□□□ -0.26
HCFC2-202ENST00000544223 KRT36O76013 467 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 ESRRBO95718 433 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 APODP05090 189 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 VCLP18206 1134 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 GPR1P46091 355 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 BDKRB1P46663 353 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 TFF2Q03403 129 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 CYLC2Q14093 348 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-202ENST00000544223 ABRAXAS2Q15018 415 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 KIF19Q2TAC6 998 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 TMIEQ8NEW7 156 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 METTL6Q8TCB7 284 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 GANCQ8TET4 914 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 PANX3Q96QZ0 392 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 TACO1Q9BSH4 297 aaKnown RBP13.4□□□□□ -0.26
HCFC2-202ENST00000544223 TRMOQ9BU70 441 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 FZD3Q9NPG1 666 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 OBP2AQ9NY56 170 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 NUDT4Q9NZJ9 180 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 LIMD1Q9UGP4 676 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 STX16O14662 325 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 SH3BGRLO75368 114 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 PAK4O96013 591 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-202ENST00000544223 S100BP04271 92 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-202ENST00000544223 GALNT1Q10472 559 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-202ENST00000544223 IL27RAQ6UWB1 636 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 PHYKPLQ8IUZ5 450 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 SCUBE1Q8IWY4 988 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 C2orf73Q8N5S3 287 aaPredicted RBP13.4□□□□□ -0.26
HCFC2-202ENST00000544223 DDHD1Q8NEL9 900 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 LRIG1Q96JA1 1093 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 MBNL1Q9NR56 388 aaKnown RBP13.4□□□□□ -0.26
HCFC2-202ENST00000544223 ATXN10Q9UBB4 475 aa13.4□□□□□ -0.26
HCFC2-202ENST00000544223 CFAP20Q9Y6A4 193 aaKnown RBP13.4□□□□□ -0.26
HCFC2-202ENST00000544223 MAGEC1O60732 1142 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 COL9A1P20849 921 aa13.39□□□□□ -0.27
HCFC2-202ENST00000544223 SOX11P35716 441 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms