RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 MAP1BP46821 2468 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 C1QTNF8P60827 252 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 SLC13A2Q13183 592 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 CRTC2Q53ET0 693 aaPredicted RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 EIF3MQ7L2H7 374 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 GKN2Q86XP6 184 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 RASGRP3Q8IV61 690 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 CLHC1Q8NHS4 586 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 WDR60Q8WVS4 1066 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 KIAA1143Q96AT1 154 aaPredicted RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 MIPEPQ99797 713 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 FNDC11Q9BVV2 318 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 NOD2Q9HC29 1040 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 ITM2CQ9NQX7 267 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 SAR1AQ9NR31 198 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 ALKBH4Q9NXW9 302 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 ZDHHC3Q9NYG2 299 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 NFKBIL1Q9UBC1 381 aaPredicted RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 FBXW2Q9UKT8 454 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 ARL5AQ9Y689 179 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 POMT1Q9Y6A1 747 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 J3KRW8 73 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 COCHO43405 550 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 PEX1O43933 1283 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 UGT1A9O60656 530 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 RFPL2O75678 378 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 UBXN7O94888 489 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 LCA5LO95447 670 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 CBX6O95503 412 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 UGT1A6P19224 532 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 UGT1A1P22309 533 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 UGT1A4P22310 534 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 UGT1A3P35503 534 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 UGT1A5P35504 534 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 SOX6P35712 828 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 IDH2P48735 452 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 CLCNKAP51800 687 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 HADHBP55084 474 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 TLR1Q15399 786 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 RALGPS1Q5JS13 557 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 POMZP3Q6PJE2 187 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 LYSMD3Q7Z3D4 306 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 TRABD2AQ86V40 505 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 MREGQ8N565 214 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 SMG8Q8ND04 991 aaKnown RBP6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 OR6Y1Q8NGX8 325 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 LMX1AQ8TE12 382 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 XAGE5Q8WWM1 108 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 TTYH3Q9C0H2 523 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 KLHL4Q9C0H6 718 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 SLITRK2Q9H156 845 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 UGT1A7Q9HAW7 530 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 UGT1A10Q9HAW8 530 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 UGT1A8Q9HAW9 530 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 SPAG4Q9NPE6 437 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 C8orf4Q9NR00 106 aa6.8□□□□□ -1.32
SRGAP1-206ENST00000543397 EIF3FO00303 357 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 MYL12BO14950 172 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 ARHGEF9O43307 516 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 B3GALT2O43825 422 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 GPR32O75388 356 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 SMNDC1O75940 238 aaKnown RBP eCLIP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 ZNF8P17098 575 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 TALDO1P37837 337 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 ETV5P41161 510 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 LCP2Q13094 533 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 HEPACAMQ14CZ8 416 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 TPRG1Q6ZUI0 275 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 ZNF605Q86T29 641 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 DEFB119Q8N690 84 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 DCBLD1Q8N8Z6 715 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 SIDT2Q8NBJ9 832 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 OR13C4Q8NGS5 318 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 HHIPL1Q96JK4 782 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 C9orf16Q9BUW7 83 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 ANKHQ9HCJ1 492 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 TRPS1Q9UHF7 1281 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CAB39Q9Y376 341 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 AP4S1Q9Y587 144 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 PRRC2BQ5JSZ5 2229 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 RGSL1A5PLK6 1076 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 GPR89AB7ZAQ6 455 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CLOCKO15516 846 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 ATP6V1G1O75348 118 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 KLK3P07288 261 aaPredicted RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 GPR89BP0CG08 455 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 PLA2G16P53816 162 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 CBX3Q13185 183 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 TSNQ15631 228 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 BEND5Q7L4P6 421 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 SMYD1Q8NB12 490 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 LRRN4CLQ8ND94 238 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 SUN3Q8TAQ9 357 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 DNASE1L2Q92874 299 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 ARHGEF3Q9NR81 526 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 KCND1Q9NSA2 647 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 DNAAF2Q9NVR5 837 aaKnown RBP6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 MALT1Q9UDY8 824 aa6.79□□□□□ -1.32
SRGAP1-206ENST00000543397 DNAJC25-GNG10A0A024R161 153 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms