RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 GPR3P46089 330 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 HSPA14Q0VDF9 509 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 SLMAPQ14BN4 828 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 PLEKHS1Q5SXH7 462 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 N4BP2L1Q5TBK1 243 aaPredicted RBP16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 STRA8Q7Z7C7 330 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 PDZD3Q86UT5 571 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 RBM12BQ8IXT5 1001 aaKnown RBP16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 SLC22A15Q8IZD6 547 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 FBF1Q8TES7 1133 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 ADAMTS14Q8WXS8 1223 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 UCK1Q9HA47 277 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 SLC40A1Q9NP59 571 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 IMP3Q9NV31 184 aaKnown RBP16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 KLHL42Q9P2K6 505 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 MED16Q9Y2X0 877 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 CFAP20Q9Y6A4 193 aaKnown RBP16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 RP1P56715 2156 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 CXorf49A8MYA2 514 aaPredicted RBP16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 OPA1O60313 960 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 PIAS1O75925 651 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 ACADLP28330 430 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 PHBP35232 272 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 CSE1LP55060 971 aaKnown RBP16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 GBX1Q14549 363 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 DHRS13Q6UX07 377 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 SPRED1Q7Z699 444 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 VRK3Q8IV63 474 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 ZBTB2Q8N680 514 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 UBXN4Q92575 508 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 FAM136AQ96C01 138 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 NDNQ99608 321 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 SLC38A3Q99624 504 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 GALPQ9UBC7 116 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 HEBP2Q9Y5Z4 205 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 DCHS1Q96JQ0 3298 aa16.71■□□□□ 0.27
RABGGTA-203ENST00000543002 PRAMEF33A0A0G2JMD5 474 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 LILRA5A6NI73 299 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 ZW10O43264 779 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 B4GAT1O43505 415 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 VPS26AO75436 327 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 FAM153BP0C7A2 387 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 MYBL2P10244 700 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 ALDH4A1P30038 563 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 ABCG1P45844 678 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 CLCN7P51798 805 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 CCL7P80098 99 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 ILF2Q12905 390 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 KBTBD12Q3ZCT8 623 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 FAM153CQ494X1 144 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 RBM20Q5T481 1227 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 DUS1LQ6P1R4 473 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 TMEM26Q6ZUK4 368 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 ZC3HC1Q86WB0 502 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 Q8N9G6 341 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 WDR48Q8TAF3 677 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 ZFPM2Q8WW38 1151 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 TFGQ92734 400 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 CPNE1Q99829 537 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 MCMBPQ9BTE3 642 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 FUT8Q9BYC5 575 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 ABCG4Q9H172 646 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 DHRS7Q9Y394 339 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 COLEC10Q9Y6Z7 277 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 NTN3O00634 580 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 ACSL3O95573 720 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 CD9P21926 228 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 NDUFS1P28331 727 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 ATP5DP30049 168 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 EPHA4P54764 986 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 OR1D5P58170 312 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 TIAL1Q01085 375 aaKnown RBP eCLIP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 INSM1Q01101 510 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 NAB1Q13506 487 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 TTLL9Q3SXZ7 439 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 UBAP2Q5T6F2 1119 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 HECTD2Q5U5R9 776 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 UGT3A1Q6NUS8 523 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 CCNI2Q6ZMN8 369 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 RAB44Q7Z6P3 723 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 ZNF761Q86XN6 746 aaPredicted RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 CTAGE3PQ8IX95 158 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 GSPT2Q8IYD1 628 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 PPM1NQ8N819 430 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 SIDT2Q8NBJ9 832 aaKnown RBP16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 GIMAP7Q8NHV1 300 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 INPP5DQ92835 1189 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 GPR21Q99679 349 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 SLC30A3Q99726 388 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 TXLNGYQ9BZA5 131 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 LRRN3Q9H3W5 708 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 RHOJQ9H4E5 214 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 MVB12BQ9H7P6 319 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 KCNK4Q9NYG8 393 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 TAS2R13Q9NYV9 303 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 TXNDC16Q9P2K2 825 aa16.7■□□□□ 0.26
RABGGTA-203ENST00000543002 IGHV1OR21-1A0A087WYE8 117 aa16.69■□□□□ 0.26
RABGGTA-203ENST00000543002 A0A1W2PQM1 296 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms