RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 TNIP2Q8NFZ5 429 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 OR8J3Q8NGG0 315 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 FAM110BQ8TC76 370 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 OSCP1Q8WVF1 389 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 ADI1Q9BV57 179 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 TM6SF2Q9BZW4 377 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 ATP13A3Q9H7F0 1226 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 IPPKQ9H8X2 491 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 CD320Q9NPF0 282 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 IL26Q9NPH9 171 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 ABCB8Q9NUT2 735 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 OLAHQ9NV23 265 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 INTS7Q9NVH2 962 aaKnown RBP6.44□□□□□ -1.38
PTPRO-208ENST00000542557 TUBA8Q9NY65 449 aaPredicted RBP6.44□□□□□ -1.38
PTPRO-208ENST00000542557 TRPS1Q9UHF7 1281 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 EVLQ9UI08 416 aaPredicted RBP6.44□□□□□ -1.38
PTPRO-208ENST00000542557 ZNF639Q9UID6 485 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 SLC8A2Q9UPR5 921 aa6.44□□□□□ -1.38
PTPRO-208ENST00000542557 A0A0U1RQS6 177 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 TRIM64A6NGJ6 449 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 K7ERQ8 282 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 SLC28A1O00337 649 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 ACOX3O15254 700 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 SMAD6O43541 496 aaKnown RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 RGS14O43566 566 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 TULP3O75386 442 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 SLC25A14O95258 325 aaPredicted RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 BPIP17213 487 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 HRH2P25021 359 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 VARSP26640 1264 aaKnown RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 SERPINA4P29622 427 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 HMOX2P30519 316 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 HNF1BP35680 557 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 PIK3CGP48736 1102 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 CCL23P55773 120 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 SLC7A9P82251 487 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 PWP1Q13610 501 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 KIAA0040Q15053 153 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 RBBP5Q15291 538 aaKnown RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 C11orf91Q3C1V1 193 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 SLC36A3Q495N2 470 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 MPPE1Q53F39 396 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 HTR3DQ70Z44 454 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 DDX53Q86TM3 631 aaKnown RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 APCDD1Q8J025 514 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 NXPE1Q8N323 547 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 AADATQ8N5Z0 425 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 ARL14EPQ8N8R7 260 aaPredicted RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 GLB1L3Q8NCI6 653 aaPredicted RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 ZNF689Q96CS4 500 aaPredicted RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 FRMD6Q96NE9 622 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 CCDC115Q96NT0 180 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 NTMT1Q9BV86 223 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 BOCQ9BWV1 1114 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 CD244Q9BZW8 370 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 NSUN3Q9H649 340 aaKnown RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 CLK4Q9HAZ1 481 aaKnown RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 RC3H2Q9HBD1 1191 aaKnown RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 SMOXQ9NWM0 555 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 ELOVL2Q9NXB9 296 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 POLR3HQ9Y535 204 aaPredicted RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 PRSS21Q9Y6M0 314 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 DENND4CQ5VZ89 1909 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 MYOCOSA0A1B0GUC4 107 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 K7EPI3 171 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 BMP10O95393 424 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 EBLN1P0CF75 366 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 G6PDP11413 515 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 MTHFD1P11586 935 aaKnown RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 CDH1P12830 882 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 ETS2P15036 469 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 LAG3P18627 525 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 CA5AP35218 305 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 HSPA7P48741 367 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 CREMQ03060 361 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 MERTKQ12866 999 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 LMAN2Q12907 356 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 COL19A1Q14993 1142 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 ABRAXAS2Q15018 415 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 AP5B1Q2VPB7 878 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 SLC2A7Q6PXP3 512 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 TRIM46Q7Z4K8 759 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 MILR1Q7Z6M3 343 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 DCBLD1Q8N8Z6 715 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 LEMD2Q8NC56 503 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 ZFP28Q8NHY6 868 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 FIBINQ8TAL6 211 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 BPIFB1Q8TDL5 484 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 RHBDF1Q96CC6 855 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 NSMCE2Q96MF7 247 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 TMEM74Q96NL1 305 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 CGREF1Q99674 301 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 SLC29A3Q9BZD2 475 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 TGIF2Q9GZN2 237 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 RPF2Q9H7B2 306 aaKnown RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 PAK6Q9NQU5 681 aaPredicted RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 MRPL17Q9NRX2 175 aaKnown RBP6.43□□□□□ -1.38
PTPRO-208ENST00000542557 WWOXQ9NZC7 414 aa6.43□□□□□ -1.38
PTPRO-208ENST00000542557 SLAMF8Q9P0V8 285 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms