RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 TMPRSS15P98073 1019 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 CACNG1Q06432 222 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 PRKAA1Q13131 559 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 DNASE1L3Q13609 305 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 TUBB2AQ13885 445 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 SEPT6Q14141 434 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 FAM71DQ8N9W8 422 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 SPDYE1Q8NFV5 336 aaPredicted RBP15.23■□□□□ 0.03
VPS33A-206ENST00000542310 C9orf43Q8TAL5 461 aaPredicted RBP15.23■□□□□ 0.03
VPS33A-206ENST00000542310 TUBB2BQ9BVA1 445 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 FRMD8P1Q9BZ68 369 aaPredicted RBP15.23■□□□□ 0.03
VPS33A-206ENST00000542310 OR52A5Q9H2C5 316 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 LHX9Q9NQ69 397 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 FGF21Q9NSA1 209 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 POMT2Q9UKY4 750 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 PADI1Q9ULC6 663 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 PACSIN2Q9UNF0 486 aaPredicted RBP15.23■□□□□ 0.03
VPS33A-206ENST00000542310 MRPS18BQ9Y676 258 aaKnown RBP15.23■□□□□ 0.03
VPS33A-206ENST00000542310 IFRD1O00458 451 aaPredicted RBP15.22■□□□□ 0.03
VPS33A-206ENST00000542310 CPNE3O75131 537 aaKnown RBP15.22■□□□□ 0.03
VPS33A-206ENST00000542310 AP2A2O94973 939 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 ZIC2O95409 532 aaPredicted RBP15.22■□□□□ 0.03
VPS33A-206ENST00000542310 TIAF1O95411 115 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 METTL18O95568 372 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 FTCDO95954 541 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 MSL3P1P0C860 447 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 KPNA2P52292 529 aaKnown RBP15.22■□□□□ 0.03
VPS33A-206ENST00000542310 GDF10P55107 478 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 NFKB2Q00653 900 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 KCNC4Q03721 635 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 SPARCL1Q14515 664 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 ITIH4Q14624 930 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 GSE1Q14687 1217 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 ZRANB3Q5FWF4 1079 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 TMTC4Q5T4D3 741 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 PWWP2BQ6NUJ5 590 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 C16orf46Q6P387 395 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 ZNF449Q6P9G9 518 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 PACS1Q6VY07 963 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 LINC00523Q86TU6 105 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 SERPINA9Q86WD7 417 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 CFAP206Q8IYR0 622 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 RNF10Q8N5U6 811 aaKnown RBP15.22■□□□□ 0.03
VPS33A-206ENST00000542310 ELMO2Q96JJ3 720 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 TMEM121Q9BTD3 319 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 MVB12BQ9H7P6 319 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 FANCEQ9HB96 536 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 SYTL2Q9HCH5 934 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 C1GALT1Q9NS00 363 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 FAM8A1Q9UBU6 413 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 ANAPC2Q9UJX6 822 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 POLHQ9Y253 713 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 CAPN6Q9Y6Q1 641 aa15.22■□□□□ 0.03
VPS33A-206ENST00000542310 OR6C74A6NCV1 312 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 MROH6A6NGR9 719 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 KRT33BQ14525 404 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 KCNAB1Q14722 419 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 POU6F1Q14863 301 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 DEFB109BQ30KR1 87 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 SEL1L2Q5TEA6 688 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 LILRA3Q8N6C8 439 aaPredicted RBP15.21■□□□□ 0.03
VPS33A-206ENST00000542310 CT55Q8WUE5 264 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 NAT14Q8WUY8 206 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 CDKN2AIPNLQ96HQ2 116 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 LRFN5Q96NI6 719 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 DESI2Q9BSY9 194 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 GPR87Q9BY21 358 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 TSGA10Q9BZW7 698 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 FAM96AQ9H5X1 160 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 R3HDM2Q9Y2K5 976 aaKnown RBP15.21■□□□□ 0.03
VPS33A-206ENST00000542310 KCNMB2Q9Y691 235 aa15.21■□□□□ 0.03
VPS33A-206ENST00000542310 FLNBO75369 2602 aaKnown RBP15.21■□□□□ 0.03
VPS33A-206ENST00000542310 CCL22O00626 93 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 CREG1O75629 220 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 POLBP06746 335 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 STIP1P31948 543 aaKnown RBP15.2■□□□□ 0.02
VPS33A-206ENST00000542310 NSG1P42857 185 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 LAMB3Q13751 1172 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 DBN1Q16643 649 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 LACTB2Q53H82 288 aaPredicted RBP15.2■□□□□ 0.02
VPS33A-206ENST00000542310 ATP1A1-AS1Q5TC04 95 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 LCN9Q8WX39 176 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 ZNF501Q96CX3 271 aaPredicted RBP15.2■□□□□ 0.02
VPS33A-206ENST00000542310 ALS2CR12Q96Q35 445 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 PITPNM3Q9BZ71 974 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 TRIM4Q9C037 500 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 SRMSQ9H3Y6 488 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 TFB2MQ9H5Q4 396 aaKnown RBP15.2■□□□□ 0.02
VPS33A-206ENST00000542310 SOHLH2Q9NX45 425 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 RIMKLBQ9ULI2 386 aa15.2■□□□□ 0.02
VPS33A-206ENST00000542310 UBR5O95071 2799 aaPredicted RBP15.2■□□□□ 0.02
VPS33A-206ENST00000542310 GOLGA6L6A8MZA4 724 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 LIN7AO14910 233 aaPredicted RBP15.19■□□□□ 0.02
VPS33A-206ENST00000542310 KATNA1O75449 491 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 SCRG1O75711 98 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 SUN1O94901 812 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 GAS8O95995 478 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 FTH1P02794 183 aa15.19■□□□□ 0.02
VPS33A-206ENST00000542310 POLR2CP19387 275 aaPredicted RBP15.19■□□□□ 0.02
VPS33A-206ENST00000542310 CDH3P22223 829 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms