RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 ATG14Q6ZNE5 492 aa17.03■□□□□ 0.32
TRPT1-212ENST00000542040 PRICKLE2Q7Z3G6 844 aa17.03■□□□□ 0.32
TRPT1-212ENST00000542040 SERPINA9Q86WD7 417 aa17.03■□□□□ 0.32
TRPT1-212ENST00000542040 TMEM139Q8IV31 216 aa17.03■□□□□ 0.32
TRPT1-212ENST00000542040 EXD3Q8N9H8 876 aa17.03■□□□□ 0.32
TRPT1-212ENST00000542040 APOBEC4Q8WW27 367 aaKnown RBP17.03■□□□□ 0.32
TRPT1-212ENST00000542040 LCN9Q8WX39 176 aa17.03■□□□□ 0.32
TRPT1-212ENST00000542040 STARD8Q92502 1023 aa17.03■□□□□ 0.32
TRPT1-212ENST00000542040 ELMO2Q96JJ3 720 aa17.03■□□□□ 0.32
TRPT1-212ENST00000542040 DNAJC1Q96KC8 554 aaKnown RBP17.03■□□□□ 0.32
TRPT1-212ENST00000542040 SEMA4CQ9C0C4 833 aa17.03■□□□□ 0.32
TRPT1-212ENST00000542040 FAM96AQ9H5X1 160 aa17.03■□□□□ 0.32
TRPT1-212ENST00000542040 SMARCAL1Q9NZC9 954 aa17.03■□□□□ 0.32
TRPT1-212ENST00000542040 ANAPC5Q9UJX4 755 aa17.03■□□□□ 0.32
TRPT1-212ENST00000542040 CFAP20Q9Y6A4 193 aaKnown RBP17.03■□□□□ 0.32
TRPT1-212ENST00000542040 OR6C74A6NCV1 312 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 C21orf140B9A014 251 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 LIN7AO14910 233 aaPredicted RBP17.02■□□□□ 0.32
TRPT1-212ENST00000542040 KIF1CO43896 1103 aaKnown RBP17.02■□□□□ 0.32
TRPT1-212ENST00000542040 IFNB1P01574 187 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 OR56A5P0C7T3 313 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 TPH1P17752 444 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 RPS15P62841 145 aaKnown RBP17.02■□□□□ 0.32
TRPT1-212ENST00000542040 TUBB4BP68371 445 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 SH3BP2P78314 561 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 CDC20Q12834 499 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 KCNAB2Q13303 367 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 MSLNQ13421 630 aaPredicted RBP17.02■□□□□ 0.32
TRPT1-212ENST00000542040 OLIG2Q13516 323 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 TUBB2AQ13885 445 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 TIPARPQ7Z3E1 657 aaKnown RBP17.02■□□□□ 0.32
TRPT1-212ENST00000542040 GPR150Q8NGU9 434 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 MAP3K3Q99759 626 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 TUBB2BQ9BVA1 445 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 GPR87Q9BY21 358 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 COG4Q9H9E3 785 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 C1GALT1Q9NS00 363 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 HOMER3Q9NSC5 361 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 STARD5Q9NSY2 213 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 SOHLH2Q9NX45 425 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 PAK5Q9P286 719 aa17.02■□□□□ 0.32
TRPT1-212ENST00000542040 IGLV3-16A0A075B6K0 115 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 TRBV5-4A0A0C4DH59 114 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 LIASO43766 372 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 KATNA1O75449 491 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 KLK3P07288 261 aaPredicted RBP17.01■□□□□ 0.31
TRPT1-212ENST00000542040 PRKAR1AP10644 381 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 WT1P19544 449 aaPredicted RBP17.01■□□□□ 0.31
TRPT1-212ENST00000542040 CDH3P22223 829 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 MSNP26038 577 aaKnown RBP17.01■□□□□ 0.31
TRPT1-212ENST00000542040 POLE2P56282 527 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 SYTL3Q4VX76 610 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 AARS2Q5JTZ9 985 aaKnown RBP17.01■□□□□ 0.31
TRPT1-212ENST00000542040 C16orf46Q6P387 395 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 SLC13A5Q86YT5 568 aaPredicted RBP17.01■□□□□ 0.31
TRPT1-212ENST00000542040 D2HGDHQ8N465 521 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 GALNT6Q8NCL4 622 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 OR4E2Q8NGC2 313 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 PEX13Q92968 403 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 SLC7A5P2Q9GIP4 190 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 TFB2MQ9H5Q4 396 aaKnown RBP17.01■□□□□ 0.31
TRPT1-212ENST00000542040 FGF21Q9NSA1 209 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 KCND1Q9NSA2 647 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 POLG2Q9UHN1 485 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 RIMKLBQ9ULI2 386 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 ZKSCAN5Q9Y2L8 839 aa17.01■□□□□ 0.31
TRPT1-212ENST00000542040 IGHV5-51A0A0C4DH38 117 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 GSAPA4D1B5 854 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 MROH6A6NGR9 719 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 NKX2-8O15522 239 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 CPNE3O75131 537 aaKnown RBP17■□□□□ 0.31
TRPT1-212ENST00000542040 CCDC175P0C221 793 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 ADRA1DP25100 572 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 PRAMEP78395 509 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 AFTPHQ6ULP2 937 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 GSTA5Q7RTV2 222 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 TMEM126BQ8IUX1 230 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 LRRC8AQ8IWT6 810 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 UNC5BQ8IZJ1 945 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 TFGQ92734 400 aaPredicted RBP17■□□□□ 0.31
TRPT1-212ENST00000542040 N4BP2L2Q92802 583 aaPredicted RBP17■□□□□ 0.31
TRPT1-212ENST00000542040 RANBP9Q96S59 729 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 LHX9Q9NQ69 397 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 SERTAD3Q9UJW9 196 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 CROTQ9UKG9 612 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 POLHQ9Y253 713 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 CAPN6Q9Y6Q1 641 aa17■□□□□ 0.31
TRPT1-212ENST00000542040 C2orf74A8MZ97 194 aa16.99■□□□□ 0.31
TRPT1-212ENST00000542040 PFDN6O15212 129 aa16.99■□□□□ 0.31
TRPT1-212ENST00000542040 SUN1O94901 812 aa16.99■□□□□ 0.31
TRPT1-212ENST00000542040 RPN2P04844 631 aa16.99■□□□□ 0.31
TRPT1-212ENST00000542040 POLR2CP19387 275 aaPredicted RBP16.99■□□□□ 0.31
TRPT1-212ENST00000542040 CA5AP35218 305 aa16.99■□□□□ 0.31
TRPT1-212ENST00000542040 GDF10P55107 478 aa16.99■□□□□ 0.31
TRPT1-212ENST00000542040 KCNC4Q03721 635 aa16.99■□□□□ 0.31
TRPT1-212ENST00000542040 DEFB109BQ30KR1 87 aa16.99■□□□□ 0.31
TRPT1-212ENST00000542040 FASTKD1Q53R41 847 aaKnown RBP16.99■□□□□ 0.31
TRPT1-212ENST00000542040 PACS1Q6VY07 963 aa16.99■□□□□ 0.31
TRPT1-212ENST00000542040 AMIGO1Q86WK6 493 aa16.99■□□□□ 0.31
TRPT1-212ENST00000542040 PPHLN1Q8NEY8 458 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms