RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 CAVIN1Q6NZI2 390 aaKnown RBP3.17□□□□□ -1.9
USP28-210ENST00000542033 UNQ6126/PRO20091Q6UXV3 157 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 PACS1Q6VY07 963 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 PLPPR4Q7Z2D5 763 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 SPATA21Q7Z572 469 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 DNAJB7Q7Z6W7 309 aaPredicted RBP3.17□□□□□ -1.9
USP28-210ENST00000542033 METTL23Q86XA0 190 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 IQCA1Q86XH1 822 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 ERC1Q8IUD2 1116 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 EPHX4Q8IUS5 362 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 CHERPQ8IWX8 916 aaKnown RBP3.17□□□□□ -1.9
USP28-210ENST00000542033 PCDH20Q8N6Y1 951 aaKnown RBP3.17□□□□□ -1.9
USP28-210ENST00000542033 TRIML1Q8N9V2 468 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 SMYD1Q8NB12 490 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 OR2AK2Q8NG84 335 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 OR6J1Q8NGC5 347 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 DEPDC1BQ8WUY9 529 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 PIBF1Q8WXW3 757 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 LZICQ8WZA0 190 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 FIG4Q92562 907 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 EXOC4Q96A65 974 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 LRRC59Q96AG4 307 aaKnown RBP3.17□□□□□ -1.9
USP28-210ENST00000542033 PPP1R14BQ96C90 147 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 LRRC45Q96CN5 670 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 CFAP57Q96MR6 1250 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 IL17FQ96PD4 163 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 GBP5Q96PP8 586 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 SPAG5Q96R06 1193 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 PAFAH2Q99487 392 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 TCHPQ9BT92 498 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 HGH1Q9BTY7 390 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 CCDC106Q9BWC9 280 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 DDX31Q9H8H2 851 aaKnown RBP3.17□□□□□ -1.9
USP28-210ENST00000542033 XAB2Q9HCS7 855 aaKnown RBP3.17□□□□□ -1.9
USP28-210ENST00000542033 BATF3Q9NR55 127 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.17□□□□□ -1.9
USP28-210ENST00000542033 OR14J1Q9UGF5 321 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 KCNS2Q9ULS6 477 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 PCDHAC2Q9Y5I4 1007 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 N6AMT1Q9Y5N5 214 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 ZFP37Q9Y6Q3 630 aaPredicted RBP3.17□□□□□ -1.9
USP28-210ENST00000542033 SMG6Q86US8 1419 aaKnown RBP3.17□□□□□ -1.9
USP28-210ENST00000542033 FLT1P17948 1338 aa3.17□□□□□ -1.9
USP28-210ENST00000542033 IGHV4OR15-8A0A075B7B6 117 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 H3BQ06 376 aaPredicted RBP3.16□□□□□ -1.9
USP28-210ENST00000542033 M0QZ24 198 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 KIF2AO00139 706 aaPredicted RBP3.16□□□□□ -1.9
USP28-210ENST00000542033 ADAMDEC1O15204 470 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 ATP8B1O43520 1251 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 GPC4O75487 556 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 RPS6KA5O75582 802 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 PSMD10O75832 226 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 HIST1H2ABP04908 130 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 IDO1P14902 403 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 HIST1H2ADP20671 130 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 U2AF2P26368 475 aaKnown RBP eCLIP3.16□□□□□ -1.9
USP28-210ENST00000542033 KRT2P35908 639 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 GP5P40197 560 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 FASLGP48023 281 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 CLCN3P51790 818 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 TAS2R38P59533 333 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 MRPS34P82930 218 aaKnown RBP3.16□□□□□ -1.9
USP28-210ENST00000542033 KCNC3Q14003 757 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 PNLIPRP3Q17RR3 467 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 KRBOX4Q5JUW0 171 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 SLC10A5Q5PT55 438 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 CST9LP1Q5W188 147 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 DCLRE1AQ6PJP8 1040 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 HIST3H2AQ7L7L0 130 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 GPR180Q86V85 440 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 EXOC3L1Q86VI1 746 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 CEP57Q86XR8 500 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 APLFQ8IW19 511 aaPredicted RBP3.16□□□□□ -1.9
USP28-210ENST00000542033 CEP97Q8IW35 865 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 C10orf67Q8IYJ2 551 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 RNF113BQ8IZP6 322 aaKnown RBP3.16□□□□□ -1.9
USP28-210ENST00000542033 BEST3Q8N1M1 668 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 AFAP1Q8N556 730 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 ZNF713Q8N859 430 aaPredicted RBP3.16□□□□□ -1.9
USP28-210ENST00000542033 MSANTD4Q8NCY6 345 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 KIF18AQ8NI77 898 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 FAM81AQ8TBF8 368 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 SECTM1Q8WVN6 248 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 APBB2Q92870 758 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 FAM162AQ96A26 154 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 CDCA5Q96FF9 252 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 THOC1Q96FV9 657 aaKnown RBP3.16□□□□□ -1.9
USP28-210ENST00000542033 GRAMD2BQ96HH9 432 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 PPP1R13BQ96KQ4 1090 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 QRFPRQ96P65 431 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 CITED2Q99967 270 aaPredicted RBP3.16□□□□□ -1.9
USP28-210ENST00000542033 SLC39A3Q9BRY0 314 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 MRPL9Q9BYD2 267 aaKnown RBP3.16□□□□□ -1.9
USP28-210ENST00000542033 VPS33BQ9H267 617 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 VCX3BQ9H321 246 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 DENND2DQ9H6A0 471 aaPredicted RBP3.16□□□□□ -1.9
USP28-210ENST00000542033 OPA3Q9H6K4 179 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 UBTD1Q9HAC8 227 aa3.16□□□□□ -1.9
USP28-210ENST00000542033 SEBOXQ9HB31 216 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms