RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 FSD2A1L4K1 749 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 OR2A25A4D2G3 310 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 NR5A2O00482 541 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 SERPINB2P05120 415 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 FRMD6-AS1P0C7T7 363 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 PLA2G4BP0C869 781 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 RNF224P0DH78 156 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 MAP2K2P36507 400 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 CDH11P55287 796 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 FAM205BPQ63HN1 556 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 FBXL22Q6P050 247 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 OR6C1Q96RD1 312 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 C16orf70Q9BSU1 422 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 ABHD6Q9BV23 337 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 MAK16Q9BXY0 300 aaKnown RBP5.47□□□□□ -1.53
YBX3-210ENST00000540975 TBC1D22BQ9NU19 505 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 SLC7A7Q9UM01 511 aa5.47□□□□□ -1.53
YBX3-210ENST00000540975 SOS1Q07889 1333 aaPredicted RBP5.47□□□□□ -1.53
YBX3-210ENST00000540975 PRR32B1ATL7 298 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 CTDSP2O14595 271 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 SSX4O60224 188 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 SH3BP5O60239 455 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 ITGA3P26006 1051 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 PNLIPRP2P54317 469 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 NAP1L1P55209 391 aaKnown RBP5.46□□□□□ -1.54
YBX3-210ENST00000540975 KRTAP5-11Q6L8G4 156 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 SZRD1Q7Z422 152 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 RPAP2Q8IXW5 612 aaPredicted RBP5.46□□□□□ -1.54
YBX3-210ENST00000540975 ADAD2Q8NCV1 583 aaKnown RBP5.46□□□□□ -1.54
YBX3-210ENST00000540975 ZNF248Q8NDW4 579 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 WDR20Q8TBZ3 569 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 MTERF3Q96E29 417 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 SGK494Q96LW2 274 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 GFRA4Q9GZZ7 299 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 ACKR4Q9NPB9 350 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 C2orf42Q9NWW7 574 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 WSB2Q9NYS7 404 aaPredicted RBP5.46□□□□□ -1.54
YBX3-210ENST00000540975 RHCGQ9UBD6 479 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 RABGAP1Q9Y3P9 1069 aa5.46□□□□□ -1.54
YBX3-210ENST00000540975 IGLV9-49A0A0B4J1Y8 123 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 HEPACAM2A8MVW5 462 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 PSMD14O00487 310 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 CREG1O75629 220 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 ZNF26P17031 533 aaPredicted RBP5.45□□□□□ -1.54
YBX3-210ENST00000540975 GCH1P30793 250 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 PNRC1Q12796 327 aaPredicted RBP5.45□□□□□ -1.54
YBX3-210ENST00000540975 GRTP1Q5TC63 336 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 CORO6Q6QEF8 472 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 SH2D5Q6ZV89 423 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 LDB1Q86U70 411 aaPredicted RBP5.45□□□□□ -1.54
YBX3-210ENST00000540975 CPSF7Q8N684 471 aaKnown RBP5.45□□□□□ -1.54
YBX3-210ENST00000540975 POC5Q8NA72 575 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 HSD17B8Q92506 261 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 TMEM143Q96AN5 459 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 RTP3Q9BQQ7 232 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 SDF4Q9BRK5 362 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 SPATC1LQ9H0A9 340 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 ZNF541Q9H0D2 1346 aa5.45□□□□□ -1.54
YBX3-210ENST00000540975 ZWINTO95229 277 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 NGFP01138 241 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 IGLV1-44P01699 117 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 CEACAM1P13688 526 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 CEACAM8P31997 349 aaPredicted RBP5.44□□□□□ -1.54
YBX3-210ENST00000540975 EIF5P55010 431 aaKnown RBP5.44□□□□□ -1.54
YBX3-210ENST00000540975 LGALS3BPQ08380 585 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 FCN2Q15485 313 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 MDH1BQ5I0G3 518 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 ITPRIPL1Q6GPH6 555 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 LINGO4Q6UY18 593 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 ZNF554Q86TJ5 538 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 KRTAP7-1Q8IUC3 87 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 C17orf53Q8N3J3 647 aaPredicted RBP5.44□□□□□ -1.54
YBX3-210ENST00000540975 DNAJC22Q8N4W6 341 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 OLIG1Q8TAK6 271 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 MYADMQ96S97 322 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 OSGEPL1Q9H4B0 414 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 INTS10Q9NVR2 710 aaKnown RBP5.44□□□□□ -1.54
YBX3-210ENST00000540975 ZNF148Q9UQR1 794 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.44□□□□□ -1.54
YBX3-210ENST00000540975 STK36Q9NRP7 1315 aa5.44□□□□□ -1.54
YBX3-210ENST00000540975 E9PI62 339 aa5.43□□□□□ -1.54
YBX3-210ENST00000540975 NADKO95544 446 aaPredicted RBP5.43□□□□□ -1.54
YBX3-210ENST00000540975 ACSL1P33121 698 aa5.43□□□□□ -1.54
YBX3-210ENST00000540975 ARSEP51690 589 aa5.43□□□□□ -1.54
YBX3-210ENST00000540975 SIRPAP78324 504 aa5.43□□□□□ -1.54
YBX3-210ENST00000540975 KCNJ10P78508 379 aa5.43□□□□□ -1.54
YBX3-210ENST00000540975 HYIQ5T013 277 aa5.43□□□□□ -1.54
YBX3-210ENST00000540975 HAUS6Q7Z4H7 955 aa5.43□□□□□ -1.54
YBX3-210ENST00000540975 ISCA2Q86U28 154 aa5.43□□□□□ -1.54
YBX3-210ENST00000540975 HCAR2Q8TDS4 363 aa5.43□□□□□ -1.54
YBX3-210ENST00000540975 RNF128Q8TEB7 428 aa5.43□□□□□ -1.54
YBX3-210ENST00000540975 NSUN4Q96CB9 384 aaKnown RBP5.43□□□□□ -1.54
YBX3-210ENST00000540975 NEK1Q96PY6 1258 aa5.43□□□□□ -1.54
YBX3-210ENST00000540975 PAFAH2Q99487 392 aa5.43□□□□□ -1.54
YBX3-210ENST00000540975 TRAF4Q9BUZ4 470 aaPredicted RBP5.43□□□□□ -1.54
YBX3-210ENST00000540975 VPS28Q9UK41 221 aa5.43□□□□□ -1.54
YBX3-210ENST00000540975 A0A087X002 238 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 ADAMDEC1O15204 470 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 AVILO75366 819 aa5.42□□□□□ -1.54
YBX3-210ENST00000540975 GJB3O75712 270 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms