RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 COPG2Q9UBF2 871 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 VTI1BQ9UEU0 232 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 ENTPD2Q9Y5L3 495 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 SLC30A1Q9Y6M5 507 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 HMX2A2RU54 273 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 SYCE1LA8MT33 242 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 H0YHG0 523 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 HOXC11O43248 304 aaPredicted RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 HTRA2O43464 458 aaPredicted RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 UGT1A9O60656 530 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 SMIM24O75264 130 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 VPS26AO75436 327 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 ESR1P03372 595 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 PROCP04070 461 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 LTA4HP09960 611 aaKnown RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 CYP2A6P11509 494 aaPredicted RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 ITGALP20701 1170 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 MZF1P28698 734 aaPredicted RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 SLC5A2P31639 672 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 HMGCLP35914 325 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 SLC1A2P43004 574 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 CHRNA4P43681 627 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 ZNF140P52738 457 aaPredicted RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 ARFIP2P53365 341 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 DNAJB13P59910 316 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 RACK1P63244 317 aaKnown RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 IRX1P78414 480 aaPredicted RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 DAB2P98082 770 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 MSLNQ13421 630 aaPredicted RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 CHI3L2Q15782 390 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 TYSND1Q2T9J0 566 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 MYLK3Q32MK0 819 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 CARD16Q5EG05 197 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 METTL21CQ5VZV1 264 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 LRRC8EQ6NSJ5 796 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 ZYG11AQ6WRX3 759 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 FAM47EQ6ZV65 393 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 KDELC2Q7Z4H8 507 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 SLC25A45Q8N413 288 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 RYBPQ8N488 228 aaPredicted RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 LPCAT1Q8NF37 534 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 UCMAQ8WVF2 138 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 ULK4Q96C45 1275 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 CDKN2AIPNLQ96HQ2 116 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 LYSMD1Q96S90 227 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 UNKQ9C0B0 810 aaKnown RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 ILKAPQ9H0C8 392 aaPredicted RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 UGT1A7Q9HAW7 530 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 UGT1A10Q9HAW8 530 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 UGT1A8Q9HAW9 530 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 CUEDC1Q9NWM3 386 aaPredicted RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 NCKIPSDQ9NZQ3 722 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 KLHL42Q9P2K6 505 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 LHX3Q9UBR4 397 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 TRIM33Q9UPN9 1127 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 RUVBL2Q9Y230 463 aaKnown RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 CHKBQ9Y259 395 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 SLC27A6Q9Y2P4 619 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 RRP15Q9Y3B9 282 aaKnown RBP8.25□□□□□ -1.09
CHD4-208ENST00000540960 PCDHGA8Q9Y5G5 932 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 PSAT1Q9Y617 370 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 RP1P56715 2156 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 SHANK1Q9Y566 2161 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 NBEAL1Q6ZS30 2694 aa8.25□□□□□ -1.09
CHD4-208ENST00000540960 LY6G6EA0A0G2JKS1 128 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 A0A1W2PR77 199 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 WDR91A4D1P6 747 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 QSOX1O00391 747 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 NPC1O15118 1278 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 KPNA5O15131 536 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 MUSKO15146 869 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 FZD6O60353 706 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 NPHS1O60500 1241 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 SNAP91O60641 907 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 DNAJC6O75061 913 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 SNNO75324 88 aaPredicted RBP8.24□□□□□ -1.09
CHD4-208ENST00000540960 SEMA4FO95754 770 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 S1PR4O95977 384 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 GOT2P00505 430 aaKnown RBP8.24□□□□□ -1.09
CHD4-208ENST00000540960 TPBGLP0DKB5 382 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 ACADMP11310 421 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 TYRP14679 529 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 ZNF30P17039 623 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 ZNF7P17097 686 aaPredicted RBP8.24□□□□□ -1.09
CHD4-208ENST00000540960 BGNP21810 368 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 ATP5F1P24539 256 aaPredicted RBP8.24□□□□□ -1.09
CHD4-208ENST00000540960 STC1P52823 247 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 PRKAA1Q13131 559 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 CTBP1Q13363 440 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 PDAP1Q13442 181 aaKnown RBP8.24□□□□□ -1.09
CHD4-208ENST00000540960 ITGA9Q13797 1035 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 GALNT3Q14435 633 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 QPCTQ16769 361 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 FSCBQ5H9T9 825 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 CFAP157Q5JU67 520 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 LIPMQ5VYY2 423 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 TPGS1Q6ZTW0 290 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 OTOAQ7RTW8 1153 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 PTAR1Q7Z6K3 402 aaPredicted RBP8.24□□□□□ -1.09
CHD4-208ENST00000540960 DSG4Q86SJ6 1040 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms