RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 SLC9B1P1A6NJY1 282 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 A6NL46 340 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 OR2AG2A6NM03 316 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 AGAP14A8MT82 685 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 CNOT3O75175 753 aaKnown RBP7.09□□□□□ -1.27
YBX3-209ENST00000540747 PMPCBO75439 489 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 SERPING1P05155 500 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 ST6GAL1P15907 406 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 PTPN3P26045 913 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 SPAM1P38567 509 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 HADHAP40939 763 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 CHRNA4P43681 627 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 GCGRP47871 477 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 ARCN1P48444 511 aaKnown RBP7.09□□□□□ -1.27
YBX3-209ENST00000540747 ARL4DP49703 201 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 WNT3AP56704 352 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 WASHC5Q12768 1159 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 GTF2H3Q13889 308 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 PDK1Q15118 436 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 TAZQ16635 292 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 PTCHD3Q3KNS1 767 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 TEX44Q53QW1 395 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 SIRPB2Q5JXA9 342 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 DCAF10Q5QP82 559 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 TMTC4Q5T4D3 741 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 TMEM220Q6QAJ8 160 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 NPNTQ6UXI9 565 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 FAM151BQ6UXP7 276 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 CUZD1Q86UP6 607 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 RAB43Q86YS6 212 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 TMEM151BQ8IW70 566 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 SLC34A3Q8N130 599 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 CISD2Q8N5K1 135 aaKnown RBP7.09□□□□□ -1.27
YBX3-209ENST00000540747 LILRA3Q8N6C8 439 aaPredicted RBP7.09□□□□□ -1.27
YBX3-209ENST00000540747 BEND7Q8N7W2 519 aaPredicted RBP7.09□□□□□ -1.27
YBX3-209ENST00000540747 TTC13Q8NBP0 860 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 OR2L2Q8NH16 312 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 UBE2Q2Q8WVN8 375 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 OXNAD1Q96HP4 312 aaPredicted RBP7.09□□□□□ -1.27
YBX3-209ENST00000540747 MRGPRX2Q96LB1 330 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 C5orf34Q96MH7 638 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 ZNF830Q96NB3 372 aaPredicted RBP7.09□□□□□ -1.27
YBX3-209ENST00000540747 NRTNQ99748 197 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 DPH2Q9BQC3 489 aaPredicted RBP7.09□□□□□ -1.27
YBX3-209ENST00000540747 DHRS4Q9BTZ2 278 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 ACTR5Q9H9F9 607 aaPredicted RBP7.09□□□□□ -1.27
YBX3-209ENST00000540747 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.09□□□□□ -1.27
YBX3-209ENST00000540747 UVRAGQ9P2Y5 699 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 ACSL5Q9ULC5 683 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 ENTPD4Q9Y227 616 aa7.09□□□□□ -1.27
YBX3-209ENST00000540747 SVILO95425 2214 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 A0A0A6YYK5 440 aaPredicted RBP7.08□□□□□ -1.28
YBX3-209ENST00000540747 GLYATL1P3A0A0U1RQE8 302 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 TMEM150CB9EJG8 249 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 GOLGA6L19H0YKK7 550 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 MATN2O00339 956 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 BTN3A3O00478 584 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 BTN3A1O00481 513 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 DDX3YO15523 660 aaKnown RBP7.08□□□□□ -1.28
YBX3-209ENST00000540747 HCRTR1O43613 425 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 UMODP07911 640 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 POLR2CP19387 275 aaPredicted RBP7.08□□□□□ -1.28
YBX3-209ENST00000540747 HLA-DPA1P20036 260 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 ELAVL4P26378 380 aaKnown RBP7.08□□□□□ -1.28
YBX3-209ENST00000540747 NDUFS1P28331 727 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 PRDX3P30048 256 aaKnown RBP7.08□□□□□ -1.28
YBX3-209ENST00000540747 HNRNPH3P31942 346 aaKnown RBP7.08□□□□□ -1.28
YBX3-209ENST00000540747 SSR1P43307 286 aaKnown RBP7.08□□□□□ -1.28
YBX3-209ENST00000540747 ZBED6P86452 979 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 ADCY2Q08462 1091 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 AP1B1Q10567 949 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 MSLNQ13421 630 aaPredicted RBP7.08□□□□□ -1.28
YBX3-209ENST00000540747 XRCC4Q13426 336 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 RAPSNQ13702 412 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 ITGA9Q13797 1035 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 IQCB1Q15051 598 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 LONRF2Q1L5Z9 754 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 ASTE1Q2TB18 679 aaPredicted RBP7.08□□□□□ -1.28
YBX3-209ENST00000540747 FNBP1LQ5T0N5 605 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 MRPL14Q6P1L8 145 aaKnown RBP7.08□□□□□ -1.28
YBX3-209ENST00000540747 IGFL2Q6UWQ7 119 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 CDHR3Q6ZTQ4 885 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 B4GALNT4Q76KP1 1039 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 PPP1R32Q7Z5V6 425 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 DAAM2Q86T65 1068 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 GALNT16Q8N428 558 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 ST6GALNAC3Q8NDV1 305 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 ACVR1CQ8NER5 493 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 FLVCR1-AS1Q8TAF5 88 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 GDAP1Q8TB36 358 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 NAT14Q8WUY8 206 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 SGSM3Q96HU1 749 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 C12orf66Q96MD2 445 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 IP6K3Q96PC2 410 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 GBP5Q96PP8 586 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 TRAPPC9Q96Q05 1148 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 GORASP1Q9BQQ3 440 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 PACSIN1Q9BY11 444 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 CHRNA10Q9GZZ6 450 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 OR52A5Q9H2C5 316 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms