RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 OR2T12Q8NG77 320 aa13.89□□□□□ -0.19
INO80E-203ENST00000540562 UPF1Q92900 1129 aaKnown RBP eCLIP13.89□□□□□ -0.191e-7■■■■■ 27.6
INO80E-203ENST00000540562 FOXJ1Q92949 421 aa13.89□□□□□ -0.19
INO80E-203ENST00000540562 RIC8BQ9NVN3 520 aa13.89□□□□□ -0.19
INO80E-203ENST00000540562 MBD1Q9UIS9 605 aaPredicted RBP13.89□□□□□ -0.19
INO80E-203ENST00000540562 CLEC4EQ9ULY5 219 aa13.89□□□□□ -0.19
INO80E-203ENST00000540562 MYOFQ9NZM1 2061 aa13.89□□□□□ -0.19
INO80E-203ENST00000540562 S100BP04271 92 aaPredicted RBP13.88□□□□□ -0.19
INO80E-203ENST00000540562 MBL2P11226 248 aaPredicted RBP13.88□□□□□ -0.19
INO80E-203ENST00000540562 YBEYP58557 167 aaPredicted RBP13.88□□□□□ -0.19
INO80E-203ENST00000540562 RPL26P61254 145 aaKnown RBP13.88□□□□□ -0.19
INO80E-203ENST00000540562 VAC14Q08AM6 782 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 CDH18Q13634 790 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 TXNDC8Q6A555 127 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 ANKS3Q6ZW76 656 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 APCDD1Q8J025 514 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 FBXO22Q8NEZ5 403 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 CNIH3Q8TBE1 160 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.88□□□□□ -0.19
INO80E-203ENST00000540562 CCDC138Q96M89 665 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 UROC1Q96N76 676 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 DNAAF2Q9NVR5 837 aaKnown RBP13.88□□□□□ -0.19
INO80E-203ENST00000540562 MARCH5Q9NX47 278 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 CNOT11Q9UKZ1 510 aaKnown RBP13.88□□□□□ -0.19
INO80E-203ENST00000540562 ZNF490Q9ULM2 529 aaPredicted RBP13.88□□□□□ -0.19
INO80E-203ENST00000540562 NLRC5Q86WI3 1866 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 PATJQ8NI35 1801 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 LOC730098B7Z3J9 87 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 STC2O76061 302 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 SEC24AO95486 1093 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 MYF6P23409 242 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 ITPKAP23677 461 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 DNAJB1P25685 340 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 SMAD3P84022 425 aaKnown RBP13.88□□□□□ -0.19
INO80E-203ENST00000540562 BOP1Q14137 746 aaKnown RBP13.88□□□□□ -0.19
INO80E-203ENST00000540562 MAPKAPK3Q16644 382 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 NKAPQ8N5F7 415 aaKnown RBP13.88□□□□□ -0.19
INO80E-203ENST00000540562 FUBP3Q96I24 572 aaKnown RBP eCLIP13.88□□□□□ -0.19
INO80E-203ENST00000540562 UHRF1Q96T88 793 aaPredicted RBP13.88□□□□□ -0.19
INO80E-203ENST00000540562 BARD1Q99728 777 aaKnown RBP13.88□□□□□ -0.19
INO80E-203ENST00000540562 BBS2Q9BXC9 721 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 LRRC3Q9BY71 257 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 TRIM54Q9BYV2 358 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 ATG10Q9H0Y0 220 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 NTN4Q9HB63 628 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 CRLS1Q9UJA2 301 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 TMCO1Q9UM00 188 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 Q9Y3F1 56 aa13.88□□□□□ -0.19
INO80E-203ENST00000540562 CSKP41240 450 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 TTPAP49638 278 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 STK19P49842 368 aaPredicted RBP13.87□□□□□ -0.19
INO80E-203ENST00000540562 ARSFP54793 590 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 TCTN1Q2MV58 587 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 ELMSAN1Q6PJG2 1045 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 FAM43BQ6ZT52 329 aaPredicted RBP13.87□□□□□ -0.19
INO80E-203ENST00000540562 BTLAQ7Z6A9 289 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 TMEM179BQ7Z7N9 219 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 LSRQ86X29 649 aaPredicted RBP13.87□□□□□ -0.19
INO80E-203ENST00000540562 HID1Q8IV36 788 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 ARL14EPQ8N8R7 260 aaPredicted RBP13.87□□□□□ -0.19
INO80E-203ENST00000540562 ZUFSPQ96AP4 578 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 INPP5KQ9BT40 448 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 PCDHGA8Q9Y5G5 932 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 EYSQ5T1H1 3165 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 VWA8A3KMH1 1905 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 TMEM88BA6NKF7 163 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 hCG_2039718K7EN88 272 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 TACR1P25103 407 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 HTR7P34969 479 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 ZBED5Q49AG3 693 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 ZNF648Q5T619 568 aaPredicted RBP13.87□□□□□ -0.19
INO80E-203ENST00000540562 PRMT9Q6P2P2 845 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 GALNT18Q6P9A2 607 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 DLEU7Q6UYE1 221 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 HACD2Q6Y1H2 254 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 BEND5Q7L4P6 421 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 OR52E6Q96RD3 313 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 BDH2Q9BUT1 245 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 ADGRE3Q9BY15 652 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 DPY30Q9C005 99 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 CORINQ9Y5Q5 1042 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 TRPM7Q96QT4 1865 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 PTPRDP23468 1912 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 LSM1O15116 133 aaKnown RBP13.87□□□□□ -0.19
INO80E-203ENST00000540562 EEDO75530 441 aaKnown RBP13.87□□□□□ -0.19
INO80E-203ENST00000540562 MATN4O95460 622 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 FTH1P02794 183 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 MAPKAPK2P49137 400 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 DGKEP52429 567 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 FCGRTP55899 365 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 ACVR1Q04771 509 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 PERM1Q5SV97 790 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 HECTD3Q5T447 861 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 SUSD1Q6UWL2 747 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 ZFAND4Q86XD8 727 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 ZDHHC13Q8IUH4 622 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 SCML4Q8N228 414 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 DTNBP1Q96EV8 351 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 LHPPQ9H008 270 aa13.87□□□□□ -0.19
INO80E-203ENST00000540562 STARD7Q9NQZ5 370 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms