RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 KLHDC8BQ8IXV7 354 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 NDUFAF2Q8N183 169 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 RASGEF1CQ8N431 466 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 FAM71DQ8N9W8 422 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 GLIS1Q8NBF1 620 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 GALNT6Q8NCL4 622 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 OR10G6Q8NH81 332 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 MS4A14Q96JA4 679 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 WDR24Q96S15 920 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 LGR4Q9BXB1 951 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 GPR87Q9BY21 358 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 GSDMCQ9BYG8 508 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 TRIM8Q9BZR9 551 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 ABCG8Q9H221 673 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 FGF22Q9HCT0 170 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 AGPAT4Q9NRZ5 378 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 C5AR2Q9P296 337 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 RSPH14Q9UHP6 348 aa8.7□□□□□ -1.02
TRAPPC1-202ENST00000540486 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.7□□□□□ -1.022e-6■■■□□ 16.4
TRAPPC1-202ENST00000540486 ARGFXA6NJG6 315 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 PDE2AO00408 941 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 FANCGO15287 622 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 NDST3O95803 873 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 SOD1P00441 154 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 FUCA1P04066 466 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 PCCBP05166 539 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 PIRTP0C851 137 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 ETS1P14921 441 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 ZNF30P17039 623 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 PSMB4P28070 264 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 ADRA1AP35348 466 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 KCNJ1P48048 391 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 STC1P52823 247 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 FOXM1Q08050 763 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 ILF3Q12906 894 aaKnown RBP eCLIP8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 MPP3Q13368 585 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 SNX1Q13596 522 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 PARP6Q2NL67 630 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 VWA2Q5GFL6 755 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 CRB2Q5IJ48 1285 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 SIRPB2Q5JXA9 342 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 CPZQ66K79 652 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 KCTD11Q693B1 232 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 MRPL14Q6P1L8 145 aaKnown RBP8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 NLRP8Q86W28 1048 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 NRROSQ86YC3 692 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 ZNF295-AS1Q8N0V1 137 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 NAGSQ8N159 534 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 SLC25A41Q8N5S1 370 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 PRELID2Q8N945 189 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 COG1Q8WTW3 980 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 SCAMP4Q969E2 229 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 DTD2Q96FN9 168 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 PBKQ96KB5 322 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 SPATA13Q96N96 652 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 AGAP2Q99490 1192 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 SMAD5Q99717 465 aaKnown RBP8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 ADGRE3Q9BY15 652 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 GBA3Q9H227 469 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 ACTL8Q9H568 366 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 MAGEE1Q9HCI5 957 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 TRNAU1APQ9NX07 287 aaKnown RBP8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 TAAR2Q9P1P5 351 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 CD84Q9UIB8 345 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 SHOC2Q9UQ13 582 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 OSGIN2Q9Y236 505 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 DRG1Q9Y295 367 aaKnown RBP8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 B3GNT3Q9Y2A9 372 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 SPO11Q9Y5K1 396 aa8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 ARHGEF17Q96PE2 2063 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC1-202ENST00000540486 C1orf232A0A0U1RR37 186 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 ZNF185O15231 689 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 KIF5CO60282 957 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 SNRPB2P08579 225 aaKnown RBP8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 ZSCAN5DPP0CG00 497 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 ZNF28P17035 718 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 LPOP22079 712 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 CA4P22748 312 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 FASLGP48023 281 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 SPINT3P49223 89 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 PPM1FP49593 454 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 DPTQ07507 201 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 CHAF1BQ13112 559 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 SPARCL1Q14515 664 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 IL11RAQ14626 422 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 SLC1A5Q15758 541 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 LONRF2Q1L5Z9 754 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 ZNF630Q2M218 657 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 ITPRIPL1Q6GPH6 555 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 DENND5AQ6IQ26 1287 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 DRICH1Q6PGQ1 229 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 BNC2Q6ZN30 1099 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 SYVN1Q86TM6 617 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 RAVER1Q8IY67 606 aaKnown RBP8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 NXPE1Q8N323 547 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 C17orf53Q8N3J3 647 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 GPR26Q8NDV2 337 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 FDCSPQ8NFU4 85 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 IPMKQ8NFU5 416 aa8.68□□□□□ -1.02
TRAPPC1-202ENST00000540486 SPATA3Q8NHX4 192 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms