RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 ATPAF2Q8N5M1 289 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 TRPM4Q8TD43 1214 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 ST8SIA4Q92187 359 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 MMP27Q9H306 513 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 SCPEP1Q9HB40 452 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 TMEM138Q9NPI0 162 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 GPR83Q9NYM4 423 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 ALG5Q9Y673 324 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 ECM29Q5VYK3 1845 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 BHMG1C9JSJ3 638 aaPredicted RBP10.92□□□□□ -0.66
PBX1-212ENST00000540236 INPPL1O15357 1258 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 GMDSO60547 372 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 KHDRBS3O75525 346 aaKnown RBP10.92□□□□□ -0.66
PBX1-212ENST00000540236 PRKCGP05129 697 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 MYL12AP19105 171 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 NFKB1P19838 968 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 CD86P42081 329 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 INO80DQ53TQ3 878 aaPredicted RBP10.92□□□□□ -0.66
PBX1-212ENST00000540236 HCAR2Q8TDS4 363 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 GANCQ8TET4 914 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 CHURC1Q8WUH1 139 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 PFDN5Q99471 154 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 MS4A7Q9GZW8 240 aaPredicted RBP10.92□□□□□ -0.66
PBX1-212ENST00000540236 RGS18Q9NS28 235 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 LMTK3Q96Q04 1460 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 POU3F3P20264 500 aaPredicted RBP10.92□□□□□ -0.66
PBX1-212ENST00000540236 GCNT1Q02742 428 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 EMC2Q15006 297 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 CYBRD1Q53TN4 286 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 WASH2PQ6VEQ5 465 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 RNF149Q8NC42 400 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.92□□□□□ -0.66
PBX1-212ENST00000540236 ERMAPQ96PL5 475 aaPredicted RBP10.92□□□□□ -0.66
PBX1-212ENST00000540236 SLC30A3Q99726 388 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 B3GNT4Q9C0J1 378 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 TAS2R16Q9NYV7 291 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 ACTR10Q9NZ32 417 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 INTS6Q9UL03 887 aaKnown RBP10.92□□□□□ -0.66
PBX1-212ENST00000540236 FXYD6-FXYD2A0A087WZ82 144 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 ZNF701M0R085 212 aaPredicted RBP10.92□□□□□ -0.66
PBX1-212ENST00000540236 ACADLP28330 430 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 OR4D2P58180 307 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 BMT2Q1RMZ1 405 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 ZMAT1Q5H9K5 638 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 FAM160B1Q5W0V3 765 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 PACRGLQ8N7B6 248 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 B3GALNT2Q8NCR0 500 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 SLC35B2Q8TB61 432 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 PDCD10Q9BUL8 212 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 FXYD6Q9H0Q3 95 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 INTS7Q9NVH2 962 aaKnown RBP10.92□□□□□ -0.66
PBX1-212ENST00000540236 PKP3Q9Y446 797 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 NID2Q14112 1375 aa10.92□□□□□ -0.66
PBX1-212ENST00000540236 BNIP3LO60238 219 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 DNAJB5O75953 348 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 ALDH2P05091 517 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 LTA4HP09960 611 aaKnown RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 RAP2AP10114 183 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 F8A1P23610 371 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 IFITM3Q01628 133 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 C1DQ13901 141 aaKnown RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 ANKS6Q68DC2 871 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 B3GNT8Q7Z7M8 397 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 FBXO39Q8N4B4 442 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 TMEM199Q8N511 208 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 TFAP2BQ92481 460 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 ACTR6Q9GZN1 396 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 RANBP3Q9H6Z4 567 aaPredicted RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 A0A1B0GW55 424 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 HMX3A6NHT5 357 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 GSTM1P09488 218 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 DUX4L2P0CJ85 424 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 DUX4L3P0CJ86 424 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 DUX4L4P0CJ87 422 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 DUX4L5P0CJ88 424 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 DUX4L6P0CJ89 424 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 DUX4L7P0CJ90 424 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 CFL1P23528 166 aaKnown RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 HARS2P49590 506 aaKnown RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 CD47Q08722 323 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 SCN4BQ8IWT1 228 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 RHOXF1Q8NHV9 184 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 TRIM43Q96BQ3 446 aaPredicted RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 ZC3H10Q96K80 434 aaKnown RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 CCDC115Q96NT0 180 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 RHNO1Q9BSD3 238 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 ZNF416Q9BWM5 594 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 CLPBQ9H078 707 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 IFT22Q9H7X7 185 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 DUX4Q9UBX2 424 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 BTN3A1O00481 513 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 AZIN1O14977 448 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 AXIN1O15169 862 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 CST3P01034 146 aaPredicted RBP10.91□□□□□ -0.66
PBX1-212ENST00000540236 CRHBPP24387 322 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 SLC22A9Q8IVM8 553 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 TMEM151AQ8N4L1 468 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 OXR1Q8N573 874 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 TTLQ8NG68 377 aa10.91□□□□□ -0.66
PBX1-212ENST00000540236 DDX1Q92499 740 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms