RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 C1orf21Q9H246 121 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 STMN3Q9NZ72 180 aa9.84□□□□□ -0.83
TRAF1-202ENST00000540010 EIF2B4Q9UI10 523 aaKnown RBP9.84□□□□□ -0.83
TRAF1-202ENST00000540010 DRGXA6NNA5 263 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 EFCAB14O75071 495 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 SORBS2O94875 1100 aaKnown RBP9.83□□□□□ -0.84
TRAF1-202ENST00000540010 GABRR2P28476 465 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 SLC7A1P30825 629 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 SLC6A4P31645 630 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 CBLBQ13191 982 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 TOP3AQ13472 1001 aaPredicted RBP9.83□□□□□ -0.84
TRAF1-202ENST00000540010 ZNF846Q147U1 533 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 ADGRF1Q5T601 910 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 TSTD2Q5T7W7 516 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 SH2D5Q6ZV89 423 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 VN1R5Q7Z5H4 357 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 OVCA2Q8WZ82 227 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 OMA1Q96E52 524 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 CDK15Q96Q40 435 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 MKS1Q9NXB0 559 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 TOR4AQ9NXH8 423 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 SPATA2Q9UM82 520 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 A0A088AWK7 358 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 A0A1B0GVM2 712 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 TCAF2A6NFQ2 919 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 KPNA3O00505 521 aaPredicted RBP9.83□□□□□ -0.84
TRAF1-202ENST00000540010 SNPHO15079 494 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 PRAMEF11O60813 436 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 STC2O76061 302 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 GOT2P00505 430 aaKnown RBP9.83□□□□□ -0.84
TRAF1-202ENST00000540010 C1RP00736 705 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 GM2AP17900 193 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 TXNDC8Q6A555 127 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 RANBP10Q6VN20 620 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 CCDC149Q6ZUS6 474 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 LUZP2Q86TE4 346 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 CYP4Z1Q86W10 505 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 ZC3HC1Q86WB0 502 aaKnown RBP9.83□□□□□ -0.84
TRAF1-202ENST00000540010 EPHX4Q8IUS5 362 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 OR52J3Q8NH60 311 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 ASB9Q96DX5 294 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 NODALQ96S42 347 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 ATP6V1HQ9UI12 483 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 ZNF490Q9ULM2 529 aaPredicted RBP9.83□□□□□ -0.84
TRAF1-202ENST00000540010 INSL5Q9Y5Q6 135 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 IGLV3-10A0A075B6K4 115 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 SNTNA6NMZ2 147 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 IFRD1O00458 451 aaPredicted RBP9.83□□□□□ -0.84
TRAF1-202ENST00000540010 PRMT5O14744 637 aaPredicted RBP9.83□□□□□ -0.84
TRAF1-202ENST00000540010 CXCL14O95715 111 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 PRKCGP05129 697 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 UGT1A6P19224 532 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 ITPKAP23677 461 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 IL12AP29459 219 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 TALDO1P37837 337 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 IL12RB1P42701 662 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 GNPDA1P46926 289 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 ABRQ12979 859 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 SIRPB2Q5JXA9 342 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 EPGNQ6UW88 154 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 KIAA0408Q6ZU52 694 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 TRIM74Q86UV6 250 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 TRIM73Q86UV7 250 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 AHI1Q8N157 1196 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 OR13C4Q8NGS5 318 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 PROX1Q92786 737 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 ACAT2Q9BWD1 397 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 AKTIPQ9H8T0 292 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 KLHL1Q9NR64 748 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 SNX6Q9UNH7 406 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 MRPS7Q9Y2R9 242 aaKnown RBP9.83□□□□□ -0.84
TRAF1-202ENST00000540010 COQ6Q9Y2Z9 468 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 A0A1W2PPW3 197 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 ELOVL7A1L3X0 281 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 PSMD11O00231 422 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 TMCC2O75069 709 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 GPIP06744 558 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 CHRM5P08912 532 aaPredicted RBP9.83□□□□□ -0.84
TRAF1-202ENST00000540010 ZDHHC11BP0C7U3 371 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 EPORP19235 508 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 WDR5P61964 334 aaKnown RBP9.83□□□□□ -0.84
TRAF1-202ENST00000540010 LRRC26Q2I0M4 334 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 AFMIDQ63HM1 303 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 NAPRTQ6XQN6 538 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 PROSER1Q86XN7 944 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 ARL10Q8N8L6 244 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 OR10Q1Q8NGQ4 319 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 MYEOVQ96EZ4 313 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 COQ7Q99807 217 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 VN1R3Q9BXE9 311 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.83□□□□□ -0.84
TRAF1-202ENST00000540010 CNOT6Q9ULM6 557 aaKnown RBP9.83□□□□□ -0.84
TRAF1-202ENST00000540010 CPQQ9Y646 472 aa9.83□□□□□ -0.84
TRAF1-202ENST00000540010 A8MT66 165 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 MATN2O00339 956 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 WBP4O75554 376 aaKnown RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 RPP40O75818 363 aaKnown RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 CYP7B1O75881 506 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 TSPAN19P0C672 248 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 MYL12AP19105 171 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms