RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	FAM96A	Q9H5X1	160 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CHRAC1	Q9NRG0	131 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	IMP3	Q9NV31	184 aa	Known RBP	12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PIH1D1	Q9NWS0	290 aa	Known RBP	12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SLC39A1	Q9NY26	324 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PCYOX1	Q9UHG3	505 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TMEM184B	Q9Y519	407 aa	Predicted RBP	12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SDK2	Q58EX2	2172 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	FAM237B	A0A1B0GVD1	139 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	OR5K3	A6NET4	321 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TLCD2	A6NGC4	264 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	EFCAB7	A8K855	629 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SMAP	O00193	183 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	KPNA5	O15131	536 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	KDM1A	O60341	852 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	MSL3P1	P0C860	447 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	NELFE	P18615	380 aa	Known RBP	12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PAM	P19021	973 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ACADL	P28330	430 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	MAGEA3	P43357	314 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ATP1A2	P50993	1020 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	MAPK10	P53779	464 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	BOP1	Q14137	746 aa	Known RBP	12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	GSE1	Q14687	1217 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	RNF187	Q5TA31	235 aa	Predicted RBP	12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	KIAA0930	Q6ICG6	404 aa	Predicted RBP	12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TTC27	Q6P3X3	843 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SYDE1	Q6ZW31	735 aa	Predicted RBP	12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	LMNTD2	Q8IXW0	634 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CLDN19	Q8N6F1	224 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	OR8K5	Q8NH50	307 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	RSC1A1	Q92681	617 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ART4	Q93070	314 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PANX3	Q96QZ0	392 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	UBL7	Q96S82	380 aa	Predicted RBP	12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	FAM117A	Q9C073	453 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TWSG1	Q9GZX9	223 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SYTL2	Q9HCH5	934 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CATSPERZ	Q9NTU4	200 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	OCIAD1	Q9NX40	245 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SLC2A6	Q9UGQ3	507 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	POLG2	Q9UHN1	485 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PSMD13	Q9UNM6	376 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	VPS9D1	Q9Y2B5	631 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	B3GALT1	Q9Y5Z6	326 aa		12	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SEC16A	O15027	2179 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SDR42E2	A6NKP2	422 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828		H3BMM5	538 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CD3EAP	O15446	510 aa	Known RBP	11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	GPC4	O75487	556 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TYRP1	P17643	537 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	OGN	P20774	298 aa	Known RBP	11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	MAP4	P27816	1152 aa	Known RBP	11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PBLD	P30039	288 aa	Predicted RBP	11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	MAPK9	P45984	424 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PPM1F	P49593	454 aa	Predicted RBP	11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	GFER	P55789	205 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SESN2	P58004	480 aa	Predicted RBP	11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PLCL1	Q15111	1095 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TYSND1	Q2T9J0	566 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	DNAJC21	Q5F1R6	531 aa	Known RBP	11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CACHD1	Q5VU97	1274 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	MRNIP	Q6NTE8	343 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PCGF5	Q86SE9	256 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TMEM135	Q86UB9	458 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	FAM129C	Q86XR2	697 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TBC1D21	Q8IYX1	336 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ASZ1	Q8WWH4	475 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CPT1B	Q92523	772 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TFG	Q92734	400 aa	Predicted RBP	11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	MS4A14	Q96JA4	679 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	FCRL3	Q96P31	734 aa	Predicted RBP	11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	EFHD1	Q9BUP0	239 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	AP1M1	Q9BXS5	423 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	C1GALT1	Q9NS00	363 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TRMT1	Q9NXH9	659 aa	Known RBP	11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	FOXJ2	Q9P0K8	574 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	MRFAP1	Q9Y605	127 aa		11.99	□□□□□ -0.49
CLTCL1-205	ENST00000538828	OR51F1	A6NGY5	319 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	POLR1C	O15160	346 aa	Predicted RBP	11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SLCO2B1	O94956	709 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	POLB	P06746	335 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PRSS56	P0CW18	603 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	FGF5	P12034	268 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	MPST	P25325	297 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ARNT	P27540	789 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ACY1	Q03154	408 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PRKAA1	Q13131	559 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	KRT33B	Q14525	404 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CRTC2	Q53ET0	693 aa	Predicted RBP	11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CCDC81	Q6ZN84	652 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CAND1	Q86VP6	1230 aa	Known RBP	11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	HOOK3	Q86VS8	718 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PPIL6	Q8IXY8	311 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SLC22A15	Q8IZD6	547 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	D2HGDH	Q8N465	521 aa		11.98	□□□□□ -0.49
CLTCL1-205	ENST00000538828	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.98	□□□□□ -0.49

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