RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 DNAAF3Q8N9W5 541 aa14.59□□□□□ -0.07
RAB40B-202ENST00000538809 SIDT2Q8NBJ9 832 aaKnown RBP14.59□□□□□ -0.07
RAB40B-202ENST00000538809 GALNT6Q8NCL4 622 aa14.59□□□□□ -0.07
RAB40B-202ENST00000538809 HEXDCQ8WVB3 486 aa14.59□□□□□ -0.07
RAB40B-202ENST00000538809 PPM1MQ96MI6 270 aa14.59□□□□□ -0.07
RAB40B-202ENST00000538809 NRTNQ99748 197 aa14.59□□□□□ -0.07
RAB40B-202ENST00000538809 CCM2Q9BSQ5 444 aa14.59□□□□□ -0.07
RAB40B-202ENST00000538809 CASS4Q9NQ75 786 aa14.59□□□□□ -0.07
RAB40B-202ENST00000538809 HRASLS2Q9NWW9 162 aa14.59□□□□□ -0.07
RAB40B-202ENST00000538809 LNPEPQ9UIQ6 1025 aa14.59□□□□□ -0.07
RAB40B-202ENST00000538809 ZKSCAN5Q9Y2L8 839 aa14.59□□□□□ -0.07
RAB40B-202ENST00000538809 UBA6A0AVT1 1052 aaPredicted RBP14.58□□□□□ -0.08
RAB40B-202ENST00000538809 CCDC162PA2VCL2 907 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 TLCD2A6NGC4 264 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 NKX2-8O15522 239 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 FGGP02679 453 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 ZSCAN5DPP0CG00 497 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 FOLR1P15328 257 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 MSNP26038 577 aaKnown RBP14.58□□□□□ -0.08
RAB40B-202ENST00000538809 FOXN2P32314 431 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 RPL22P35268 128 aaKnown RBP14.58□□□□□ -0.08
RAB40B-202ENST00000538809 KPNA2P52292 529 aaKnown RBP14.58□□□□□ -0.08
RAB40B-202ENST00000538809 NFKB2Q00653 900 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 CDC20Q12834 499 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 TUBB3Q13509 450 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 ATP1A1-AS1Q5TC04 95 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 FBXO38Q6PIJ6 1188 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 PPP1R3BQ86XI6 285 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 ESX1Q8N693 406 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 OR13J1Q8NGT2 312 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 STARD8Q92502 1023 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 UBXN4Q92575 508 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 STAMBPL1Q96FJ0 436 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 SLC45A3Q96JT2 553 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 SLC41A2Q96JW4 573 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 FERD3LQ96RJ6 166 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 RANBP9Q96S59 729 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 OR52A5Q9H2C5 316 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 TRIT1Q9H3H1 467 aaKnown RBP14.58□□□□□ -0.08
RAB40B-202ENST00000538809 VPS37BQ9H9H4 285 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 RAB6BQ9NRW1 208 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 SMARCAL1Q9NZC9 954 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 PAK5Q9P286 719 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 SLC2A6Q9UGQ3 507 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 RIMKLBQ9ULI2 386 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 PRSS21Q9Y6M0 314 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 RPS6KL1Q9Y6S9 549 aa14.58□□□□□ -0.08
RAB40B-202ENST00000538809 TNRC6AQ8NDV7 1962 aaKnown RBP14.58□□□□□ -0.08
RAB40B-202ENST00000538809 C17orf113A0A1B0GUU1 675 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 B8ZZF3 427 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 E7EVH7 732 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 PYCARD-AS1I3L0S3 204 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 NRDCO43847 1150 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 SPAG6O75602 509 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 FGF5P12034 268 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 POLR2CP19387 275 aaPredicted RBP14.57□□□□□ -0.08
RAB40B-202ENST00000538809 F8A1P23610 371 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 NDUFS1P28331 727 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 OAS2P29728 719 aaKnown RBP14.57□□□□□ -0.08
RAB40B-202ENST00000538809 PDHA2P29803 388 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 DLSTP36957 453 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 ARL4DP49703 201 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 ACVR1Q04771 509 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 MAP7Q14244 749 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 IL11RAQ14626 422 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 KCTD19Q17RG1 926 aaPredicted RBP14.57□□□□□ -0.08
RAB40B-202ENST00000538809 ARMC6Q6NXE6 501 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 C6orf15Q6UXA7 325 aaPredicted RBP14.57□□□□□ -0.08
RAB40B-202ENST00000538809 REXO1L1PQ8IX06 675 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 RASGEF1CQ8N431 466 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 PRELID2Q8N945 189 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 CCDC89Q8N998 374 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 OR4E2Q8NGC2 313 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 MAIP1Q8WWC4 291 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 CD180Q99467 661 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 HGH1Q9BTY7 390 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 EIF2B3Q9NR50 452 aaKnown RBP14.57□□□□□ -0.08
RAB40B-202ENST00000538809 SEMA5BQ9P283 1151 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 CROTQ9UKG9 612 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 HEBP2Q9Y5Z4 205 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 COLEC10Q9Y6Z7 277 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 SPTA1P02549 2419 aa14.57□□□□□ -0.08
RAB40B-202ENST00000538809 HEATR9A2RTY3 570 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 GSAPA4D1B5 854 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 CEP104O60308 925 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 ZIC2O95409 532 aaPredicted RBP14.56□□□□□ -0.08
RAB40B-202ENST00000538809 GAS8O95995 478 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 CXCR5P32302 372 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 KCNJ1P48048 391 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 BRD3Q15059 726 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 GPR19Q15760 415 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 SKIDA1Q1XH10 827 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.56□□□□□ -0.08
RAB40B-202ENST00000538809 TSTD2Q5T7W7 516 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 C16orf46Q6P387 395 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 BORAQ6PGQ7 559 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 NAPRTQ6XQN6 538 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 PRICKLE2Q7Z3G6 844 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 PHC3Q8NDX5 983 aa14.56□□□□□ -0.08
RAB40B-202ENST00000538809 ACVR1CQ8NER5 493 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms