RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 NR1D2Q14995 579 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 COL28A1Q2UY09 1125 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 C3orf38Q5JPI3 329 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 CCDC181Q5TID7 509 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 PDPK2PQ6A1A2 396 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 C19orf48Q6RUI8 117 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 MARK2Q7KZI7 788 aaKnown RBP6.95□□□□□ -1.3
YBX3-206ENST00000536823 KDELC2Q7Z4H8 507 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 TMC3Q7Z5M5 1100 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 B3GNT8Q7Z7M8 397 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 CDKL3Q8IVW4 592 aaPredicted RBP6.95□□□□□ -1.3
YBX3-206ENST00000536823 LSMEM2Q8N112 164 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 TXLNBQ8N3L3 684 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 TTC30BQ8N4P2 665 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 GPR26Q8NDV2 337 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 WDR36Q8NI36 951 aaKnown RBP6.95□□□□□ -1.3
YBX3-206ENST00000536823 ACTL9Q8TC94 416 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 HTR3CQ8WXA8 447 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 EID2BQ96D98 161 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 OXNAD1Q96HP4 312 aaPredicted RBP6.95□□□□□ -1.3
YBX3-206ENST00000536823 ZNF578Q96N58 590 aaPredicted RBP6.95□□□□□ -1.3
YBX3-206ENST00000536823 FCRL5Q96RD9 977 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 SRPK1Q96SB4 655 aaKnown RBP6.95□□□□□ -1.3
YBX3-206ENST00000536823 ZSCAN5AQ9BUG6 496 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 OSBPL8Q9BZF1 889 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 GPR63Q9BZJ6 419 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 GBA3Q9H227 469 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 LRRN3Q9H3W5 708 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 RMI1Q9H9A7 625 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 GCM1Q9NP62 436 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 THSD1Q9NS62 852 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 SPATS2LQ9NUQ6 558 aaKnown RBP6.95□□□□□ -1.3
YBX3-206ENST00000536823 ACTR10Q9NZ32 417 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 LRIT1Q9P2V4 623 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 KLHL3Q9UH77 587 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 TRHDEQ9UKU6 1024 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 SATB2Q9UPW6 733 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 SHOC2Q9UQ13 582 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 PCDHGA8Q9Y5G5 932 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 SPO11Q9Y5K1 396 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 COL6A6A6NMZ7 2263 aa6.95□□□□□ -1.3
YBX3-206ENST00000536823 HELZ2Q9BYK8 2649 aaKnown RBP6.95□□□□□ -1.3
YBX3-206ENST00000536823 LOC285095A0A1B0GVY8 99 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 PMS2P1A4D2B8 440 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 RHPN2P1A8MT19 583 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 GOLGA6L6A8MZA4 724 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 MIF4GDA9UHW6 222 aaKnown RBP6.94□□□□□ -1.3
YBX3-206ENST00000536823 F5H423 210 aaPredicted RBP6.94□□□□□ -1.3
YBX3-206ENST00000536823 RGS13O14921 159 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 RRP8O43159 456 aaKnown RBP6.94□□□□□ -1.3
YBX3-206ENST00000536823 DNAJC6O75061 913 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 ZNF189O75820 626 aaPredicted RBP6.94□□□□□ -1.3
YBX3-206ENST00000536823 EPOP01588 193 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 ATP1A1P05023 1023 aaKnown RBP6.94□□□□□ -1.3
YBX3-206ENST00000536823 BPIP17213 487 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 HLA-DPA1P20036 260 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 RBL1P28749 1068 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 CCKBRP32239 447 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 CETN2P41208 172 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 TNNT3P45378 269 aaPredicted RBP6.94□□□□□ -1.3
YBX3-206ENST00000536823 GEMP55040 296 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 INHBCP55103 352 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 EIF3EP60228 445 aaKnown RBP6.94□□□□□ -1.3
YBX3-206ENST00000536823 B4GALNT1Q00973 533 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 OTUD4Q01804 1114 aaKnown RBP6.94□□□□□ -1.3
YBX3-206ENST00000536823 KIF5AQ12840 1032 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 EIF3IQ13347 325 aaKnown RBP6.94□□□□□ -1.3
YBX3-206ENST00000536823 MPP3Q13368 585 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 SSPNQ14714 243 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 SLC1A5Q15758 541 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 SPATS1Q496A3 300 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 MAP9Q49MG5 647 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 SIRPB2Q5JXA9 342 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 PRAMEF13Q5VWM6 474 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 ALS2CLQ60I27 953 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 ITPRIPL1Q6GPH6 555 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 CCDC70Q6NSX1 233 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 PID1Q7Z2X4 250 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 CLEC14AQ86T13 490 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 PHYKPLQ8IUZ5 450 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 SYCE1Q8N0S2 351 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 NAGSQ8N159 534 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 ARL14Q8N4G2 192 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 TRAM1L1Q8N609 369 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 Q8N9G6 341 aaPredicted RBP6.94□□□□□ -1.3
YBX3-206ENST00000536823 SPC24Q8NBT2 197 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 SLC37A2Q8TED4 501 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 HNRNPLLQ8WVV9 542 aaKnown RBP6.94□□□□□ -1.3
YBX3-206ENST00000536823 PATE1Q8WXA2 126 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 GLYATL1Q969I3 302 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 PRR11Q96HE9 360 aaPredicted RBP6.94□□□□□ -1.3
YBX3-206ENST00000536823 PLEKHG4BQ96PX9 1271 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 FERMT1Q9BQL6 677 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 DESI2Q9BSY9 194 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 SGPP1Q9BX95 441 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 SPATA16Q9BXB7 569 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 FOXP3Q9BZS1 431 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 STRADBQ9C0K7 418 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 CARD9Q9H257 536 aa6.94□□□□□ -1.3
YBX3-206ENST00000536823 TRABDQ9H4I3 376 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms