RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 C9orf72Q96LT7 481 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 INSM2Q96T92 566 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 LRRC1Q9BTT6 524 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 WWP1Q9H0M0 922 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CASS4Q9NQ75 786 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ACSL5Q9ULC5 683 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 KALRNO60229 2985 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 FASNP49327 2511 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 COL6A6A6NMZ7 2263 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TCRBV7S3A2A0A539 114 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SMAPO00193 183 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CAPN5O15484 640 aaPredicted RBP17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SNRNP200O75643 2136 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 MTHFD1P11586 935 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 LEPRP48357 1165 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CACNG1Q06432 222 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 MORF4L2Q15014 288 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ZNF658BQ4V348 819 aaPredicted RBP17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ANKRD22Q5VYY1 191 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ANKS6Q68DC2 871 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 DUS1LQ6P1R4 473 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CCDC81Q6ZN84 652 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 NAT8LQ8N9F0 302 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 MCUQ8NE86 351 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 OR13J1Q8NGT2 312 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TGM7Q96PF1 710 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 IMP3Q9NV31 184 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 WDR70Q9NW82 654 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SNX24Q9Y343 169 aa17.46■□□□□ 0.39
TNFRSF1A-209ENST00000536717 OR51F1A6NGY5 319 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 STMND1H3BQB6 276 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 TMEM63AO94886 807 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SEC31AO94979 1220 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 FOXN2P32314 431 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 RPL21P46778 160 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 RAB15P59190 212 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 MC2RQ01718 297 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 CALCOCO2Q13137 446 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 DBN1Q16643 649 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SKIDA1Q1XH10 827 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 CAPRIN2Q6IMN6 1127 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 LRRC8BQ6P9F7 803 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PCSK4Q6UW60 755 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 TAS2R42Q7RTR8 314 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 CFAP206Q8IYR0 622 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 CLDN19Q8N6F1 224 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 HM13Q8TCT9 377 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 JPH3Q8WXH2 748 aaPredicted RBP17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 RMDN2Q96LZ7 410 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 C12orf66Q96MD2 445 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ZNF778Q96MU6 729 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 RANBP9Q96S59 729 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ASPSCR1Q9BZE9 553 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 DPH5Q9H2P9 285 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 XAB2Q9HCS7 855 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 APMAPQ9HDC9 416 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 FBXO8Q9NRD0 319 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SIDT1Q9NXL6 827 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 EPHA6Q9UF33 1036 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SLC2A6Q9UGQ3 507 aa17.45■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PIEZO2Q9H5I5 2752 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 C17orf113A0A1B0GUU1 675 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 HEATR9A2RTY3 570 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 CCDC162PA2VCL2 907 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 GOLGA8MH3BSY2 632 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 KIF1CO43896 1103 aaKnown RBP17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 POLBP06746 335 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ITGA8P53708 1063 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PPP1CAP62136 330 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SLC7A5Q01650 507 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 DCAF12Q5T6F0 453 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 DUPD1Q68J44 220 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 VASH2Q86V25 355 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 CTRCQ99895 268 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 RAB33BQ9H082 229 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 COG4Q9H9E3 785 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 BFARQ9NZS9 450 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 WHRNQ9P202 907 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ANAPC5Q9UJX4 755 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 RIMKLBQ9ULI2 386 aa17.44■□□□□ 0.38
TNFRSF1A-209ENST00000536717 TOX3O15405 576 aaPredicted RBP17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SLC35G4P0C7Q5 338 aa17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 MLNP12872 115 aa17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ADRA1DP25100 572 aa17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 NPY2RP49146 381 aa17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SESN2P58004 480 aaPredicted RBP17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ACVR1Q04771 509 aa17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 LAMB3Q13751 1172 aa17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 TSTD2Q5T7W7 516 aa17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PRSS42Q7Z5A4 293 aa17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 TEFMQ96QE5 360 aaKnown RBP17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 CCM2Q9BSQ5 444 aa17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SPRY4Q9C004 299 aa17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ZNF768Q9H5H4 540 aaKnown RBP17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PCDHB11Q9Y5F2 797 aa17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PRSS21Q9Y6M0 314 aa17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SEC16AO15027 2179 aa17.43■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ATXN7O15265 892 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 WT1P19544 449 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SEPHS1P49903 392 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms