RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CRYGNQ8WXF5 182 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 TCEAL3Q969E4 200 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 GAD1Q99259 594 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 LZTS2Q9BRK4 669 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 ZNF577Q9BSK1 485 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 ANP32EQ9BTT0 268 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 ARRDC1-AS1Q9H2J1 176 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 MINDY3Q9H8M7 445 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 LMAN1LQ9HAT1 526 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 NOD2Q9HC29 1040 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 RIC8AQ9NPQ8 531 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 GDAQ9Y2T3 454 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 HES2Q9Y543 173 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 ATG2BQ96BY7 2078 aa5.5□□□□□ -1.53
CLIP1-207ENST00000536634 CNTNAP2Q9UHC6 1331 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 IGKV6-21A0A0C4DH24 114 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 ARL5CA6NH57 179 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 PCNX2A6NKB5 2137 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 FAM90A7PA6NKC0 464 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 FAM90A22PA8MWA6 464 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 FAM90A12PA8MX19 464 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 FAM90A23PA8MXZ1 464 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 SH2B2O14492 632 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-207ENST00000536634 ECI2O75521 394 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 STBD1O95210 358 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 SERPINC1P01008 464 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 IL1AP01583 271 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 ZNF806P0C7X5 589 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 CEBPBP17676 345 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 DCTDP32321 178 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 CXCL12P48061 93 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 NOVA1P51513 510 aaKnown RBP5.49□□□□□ -1.53
CLIP1-207ENST00000536634 NAPAP54920 295 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 EGR4Q05215 589 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 SLC18A2Q05940 514 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 SLC18A3Q16572 532 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 SOWAHCQ53LP3 525 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-207ENST00000536634 PPM1LQ5SGD2 360 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 LONP2Q86WA8 852 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 SPATA2LQ8IUW3 424 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-207ENST00000536634 GHDCQ8N2G8 530 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 TEX45Q8NA69 505 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 GPT2Q8TD30 523 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 ELP5Q8TE02 316 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 DNASE1L2Q92874 299 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 PHF21BQ96EK2 531 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 GFM1Q96RP9 751 aaKnown RBP5.49□□□□□ -1.53
CLIP1-207ENST00000536634 PYM1Q9BRP8 204 aaKnown RBP5.49□□□□□ -1.53
CLIP1-207ENST00000536634 NPFFR1Q9GZQ6 430 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.49□□□□□ -1.53
CLIP1-207ENST00000536634 SUCLA2Q9P2R7 463 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-207ENST00000536634 GON4LQ3T8J9 2241 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 SPTA1P02549 2419 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 BSNQ9UPA5 3926 aa5.49□□□□□ -1.53
CLIP1-207ENST00000536634 ABCA7Q8IZY2 2146 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 TMEM8BA6NDV4 472 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 SMCO2A6NFE2 343 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 C4orf47A7E2U8 309 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 CHMP2AO43633 222 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 SLC25A17O43808 307 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 EDIL3O43854 480 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 SOX30O94993 753 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 PAPSS2O95340 614 aaPredicted RBP5.48□□□□□ -1.53
CLIP1-207ENST00000536634 HNRNPA1P09651 372 aaKnown RBP eCLIP5.48□□□□□ -1.53
CLIP1-207ENST00000536634 HOXA9P31269 272 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 GNAQP50148 359 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 SLC12A1Q13621 1099 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 EFR3AQ14156 821 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 ANKRD1Q15327 319 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 USP41Q3LFD5 358 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 KLHL22Q53GT1 634 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 LIN9Q5TKA1 542 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 JAKMIP3Q5VZ66 844 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 VITQ6UXI7 678 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 KBTBD6Q86V97 674 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 ZNF410Q86VK4 478 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 TMC8Q8IU68 726 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 RBFAQ8N0V3 343 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 RASSF8Q8NHQ8 419 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 NCOA7Q8NI08 942 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 LNX1Q8TBB1 728 aaPredicted RBP5.48□□□□□ -1.53
CLIP1-207ENST00000536634 TMEM163Q8TC26 289 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 FAM3CQ92520 227 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 ELSPBP1Q96BH3 223 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 TCEAL4Q96EI5 215 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 REEP2Q9BRK0 252 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.48□□□□□ -1.53
CLIP1-207ENST00000536634 MSTO1Q9BUK6 570 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 LRRC2Q9BYS8 371 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 UNC45AQ9H3U1 944 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 MVB12BQ9H7P6 319 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 ZNF334Q9HCZ1 680 aaPredicted RBP5.48□□□□□ -1.53
CLIP1-207ENST00000536634 NRBP2Q9NSY0 501 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 TBC1D22BQ9NU19 505 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 ADAM28Q9UKQ2 775 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 PIAS3Q9Y6X2 628 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 NUP205Q92621 2012 aa5.48□□□□□ -1.53
CLIP1-207ENST00000536634 KIF26AQ9ULI4 1882 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-207ENST00000536634 PIEZO2Q9H5I5 2752 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 RELNP78509 3460 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms