RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 MAGEA6P43360 314 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 CDK16Q00536 496 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 MC1RQ01726 317 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 CACNG1Q06432 222 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 FOXM1Q08050 763 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 ITIH4Q14624 930 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 RPE65Q16518 533 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 FNBP1LQ5T0N5 605 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 CAPRIN2Q6IMN6 1127 aaKnown RBP12.16□□□□□ -0.46
PRKDC-207ENST00000536483 FAM83HQ6ZRV2 1179 aaPredicted RBP12.16□□□□□ -0.46
PRKDC-207ENST00000536483 NLRP9Q7RTR0 991 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 PLXDC1Q8IUK5 500 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 REXO1L1PQ8IX06 675 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 ESX1Q8N693 406 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 PRELID2Q8N945 189 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 OR52K1Q8NGK4 314 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 OR13J1Q8NGT2 312 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 PBKQ96KB5 322 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 C9orf72Q96LT7 481 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 CCM2Q9BSQ5 444 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 ULBP3Q9BZM4 244 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 OSGEPL1Q9H4B0 414 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 RAB6BQ9NRW1 208 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 SIDT1Q9NXL6 827 aaKnown RBP12.16□□□□□ -0.46
PRKDC-207ENST00000536483 CRLS1Q9UJA2 301 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 DNAJC16Q9Y2G8 782 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 SLC30A1Q9Y6M5 507 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 RPS6KL1Q9Y6S9 549 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.15□□□□□ -0.46
PRKDC-207ENST00000536483 HEATR9A2RTY3 570 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 OR52A4PA6NMU1 304 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 CES2O00748 559 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 UBXN7O94888 489 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 TYRP1P17643 537 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 RPL10P27635 214 aaKnown RBP12.15□□□□□ -0.46
PRKDC-207ENST00000536483 SEPHS1P49903 392 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 SH3BP2P78314 561 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 RPA4Q13156 261 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 SEPT6Q14141 434 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 MAP7Q14244 749 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 NFE2L1Q14494 772 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 POU6F1Q14863 301 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 CYP1B1Q16678 543 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 PLA2G4EQ3MJ16 856 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 CRTC2Q53ET0 693 aaPredicted RBP12.15□□□□□ -0.46
PRKDC-207ENST00000536483 LACTB2Q53H82 288 aaPredicted RBP12.15□□□□□ -0.46
PRKDC-207ENST00000536483 PACS1Q6VY07 963 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 PIANPQ8IYJ0 282 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 CCDC89Q8N998 374 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 DCUN1D1Q96GG9 259 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 TGM7Q96PF1 710 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 PLAAQ9Y263 795 aa12.15□□□□□ -0.46
PRKDC-207ENST00000536483 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
PRKDC-207ENST00000536483 NBPF19A0A087WUL8 3843 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 K7EM74 188 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 QSOX1O00391 747 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 ZSCAN12O43309 604 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 CEP104O60308 925 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 GAS8O95995 478 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 MTHFD1P11586 935 aaKnown RBP12.14□□□□□ -0.47
PRKDC-207ENST00000536483 ETS1P14921 441 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 AMD1P17707 334 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 NR1D1P20393 614 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 AKT1P31749 480 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 FOXN2P32314 431 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 DLSTP36957 453 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 GRIA1P42261 906 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 NSG1P42857 185 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 CAPZBP47756 277 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 LEPRP48357 1165 aaKnown RBP12.14□□□□□ -0.47
PRKDC-207ENST00000536483 CD151P48509 253 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 DRG2P55039 364 aaKnown RBP12.14□□□□□ -0.47
PRKDC-207ENST00000536483 SNX1Q13596 522 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 ERV3-1Q14264 604 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 GPR18Q14330 331 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 SEPT7Q16181 437 aaKnown RBP12.14□□□□□ -0.47
PRKDC-207ENST00000536483 TSTD2Q5T7W7 516 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 C6orf15Q6UXA7 325 aaPredicted RBP12.14□□□□□ -0.47
PRKDC-207ENST00000536483 CERS6Q6ZMG9 384 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 PRSS42Q7Z5A4 293 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 SERPINA9Q86WD7 417 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 GALNT6Q8NCL4 622 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 HM13Q8TCT9 377 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 KLHL6Q8WZ60 621 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 CXorf40BQ96DE9 158 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 ELMO2Q96JJ3 720 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 OR6C1Q96RD1 312 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 INSM2Q96T92 566 aaPredicted RBP12.14□□□□□ -0.47
PRKDC-207ENST00000536483 CROTQ9UKG9 612 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 TP53TG5Q9Y2B4 290 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 PCDHB3Q9Y5E6 796 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 KCNMB2Q9Y691 235 aa12.14□□□□□ -0.47
PRKDC-207ENST00000536483 CLEC18AA5D8T8 446 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 E7EVH7 732 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 CCL22O00626 93 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 KIF1CO43896 1103 aaKnown RBP12.13□□□□□ -0.47
PRKDC-207ENST00000536483 KATNA1O75449 491 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 KIAA0754O94854 1291 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 APRTP07741 180 aa12.13□□□□□ -0.47
PRKDC-207ENST00000536483 FURINP09958 794 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms