RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 POLBP06746 335 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 HBQ1P09105 142 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 SLC1A1P43005 524 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 CHRNA4P43681 627 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 MRPL49Q13405 166 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 RAPSNQ13702 412 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 PRKD1Q15139 912 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 SLC1A5Q15758 541 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 PRR30Q53SZ7 412 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 LRRC38Q5VT99 294 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 SLC6A19Q695T7 634 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 FBXO38Q6PIJ6 1188 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 KDELC1Q6UW63 502 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 PID1Q7Z2X4 250 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 LUZP1Q86V48 1076 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ZC3H18Q86VM9 953 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 CFAP206Q8IYR0 622 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 GPR135Q8IZ08 494 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 CLEC1AQ8NC01 280 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 OR4E2Q8NGC2 313 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ZNF398Q8TD17 642 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 LCN9Q8WX39 176 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 P3H4Q92791 437 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 VAT1Q99536 393 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 DPH2Q9BQC3 489 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 CCM2Q9BSQ5 444 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 NUDT9Q9BW91 350 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ASB8Q9H765 288 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 VPS37BQ9H9H4 285 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 C1GALT1Q9NS00 363 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 GPN3Q9UHW5 284 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 SERTAD3Q9UJW9 196 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 POMT2Q9UKY4 750 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 NENFQ9UMX5 172 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 MYO9AB2RTY4 2548 aa12.62□□□□□ -0.39
TNFRSF1A-207ENST00000535958 PEX12O00623 359 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 CST8O60676 142 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 CEACAM4O75871 244 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 IGHEP01854 428 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 OTX2P32243 289 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 CD68P34810 354 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ITGA1P56199 1179 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ABRQ12979 859 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ATP1A4Q13733 1029 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 LAMB3Q13751 1172 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 TRIM14Q14142 442 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 NCF4Q15080 339 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 PLEKHS1Q5SXH7 462 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 VWA5B1Q5TIE3 1220 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 PRAMEF17Q5VTA0 474 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 LYPLAL1Q5VWZ2 237 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 MFSD7Q6UXD7 560 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ZNF517Q6ZMY9 492 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 MAMDC2Q7Z304 686 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 CCDC50Q8IVM0 306 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 SLC38A9Q8NBW4 561 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ACVR1CQ8NER5 493 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 HM13Q8TCT9 377 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ADAMTS17Q8TE56 1095 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 TM9SF4Q92544 642 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ULK4Q96C45 1275 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 LRRC45Q96CN5 670 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 RBM41Q96IZ5 413 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 MRGPRX2Q96LB1 330 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 RMDN2Q96LZ7 410 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 FER1L6-AS2Q96M78 137 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 IP6K3Q96PC2 410 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 FCRL5Q96RD9 977 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 FERD3LQ96RJ6 166 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ILKAPQ9H0C8 392 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 PCMTD2Q9NV79 361 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 IRAK4Q9NWZ3 460 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 IFNKQ9P0W0 207 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 UNC79Q9P2D8 2635 aa12.61□□□□□ -0.39
TNFRSF1A-207ENST00000535958 SRP72O76094 671 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 LCA5LO95447 670 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ATXN8OSP0DMR3 200 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ITGALP20701 1170 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 RORAP35398 523 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 LMAN1P49257 510 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 GEMP55040 296 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 WASHC5Q12768 1159 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 NR6A1Q15406 480 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 PTCHD3Q3KNS1 767 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 BCL7AQ4VC05 210 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 CCDC181Q5TID7 509 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ITPRIPL1Q6GPH6 555 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 FAM198BQ6UWH4 519 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ZNF567Q8N184 647 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 GLIS1Q8NBF1 620 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 OR4K2Q8NGD2 314 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 OR1L3Q8NH93 324 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 HEXDCQ8WVB3 486 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 HAUS1Q96CS2 278 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 CCDC42Q96M95 316 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 C5orf34Q96MH7 638 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 PPM1MQ96MI6 270 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 DHRS4Q9BTZ2 278 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 FICDQ9BVA6 458 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms