RNA–Protein interactions for RNA: ENST00000534296.5

CD44-238, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-238ENST00000534296 PLA2G4BP0C869 781 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 CFC1BP0CG36 223 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 CFC1P0CG37 223 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 FGF5P12034 268 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 MMP9P14780 707 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 EEF1DP29692 281 aaKnown RBP2.61□□□□□ -1.99
CD44-238ENST00000534296 ZNF75DP51815 510 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 NR0B1P51843 470 aaKnown RBP2.61□□□□□ -1.99
CD44-238ENST00000534296 PNLIPRP2P54317 469 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 CD81P60033 236 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 PPP2R2BQ00005 443 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 MBTD1Q05BQ5 628 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 GAGE2BQ13066 116 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 RASA2Q15283 850 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 GAGE2EQ4V326 116 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 TECRLQ5HYJ1 363 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 WDR38Q5JTN6 314 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 KRT39Q6A163 491 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 KRT80Q6KB66 452 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 GAGE2AQ6NT46 116 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 INTS8Q75QN2 995 aaKnown RBP2.61□□□□□ -1.99
CD44-238ENST00000534296 HAUS6Q7Z4H7 955 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 GPALPP1Q8IXQ4 340 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 RASGEF1CQ8N431 466 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 POGLUT1Q8NBL1 392 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 HJURPQ8NCD3 748 aaPredicted RBP2.61□□□□□ -1.99
CD44-238ENST00000534296 ADAD2Q8NCV1 583 aaKnown RBP2.61□□□□□ -1.99
CD44-238ENST00000534296 PPFIBP2Q8ND30 876 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 TSPAN14Q8NG11 270 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 ZNF524Q96C55 264 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 LGALS12Q96DT0 336 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 EGLN2Q96KS0 407 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 PAFAH2Q99487 392 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 SLX1AQ9BQ83 275 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 CCDC106Q9BWC9 280 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 KLHL4Q9C0H6 718 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 MMP27Q9H306 513 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 RABEP2Q9H5N1 569 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 DENND2DQ9H6A0 471 aaPredicted RBP2.61□□□□□ -1.99
CD44-238ENST00000534296 PDE7BQ9NP56 450 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 ADPRHL2Q9NX46 363 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 CLIC5Q9NZA1 410 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.61□□□□□ -1.99
CD44-238ENST00000534296 GAGE2DQ9UEU5 116 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 HACL1Q9UJ83 578 aa2.61□□□□□ -1.99
CD44-238ENST00000534296 KIF26BQ2KJY2 2108 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 HHLA1C9JL84 531 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 GPR137BO60478 399 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 ZWINTO95229 277 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 KCNK5O95279 499 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 GGPS1O95749 300 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 H1F0P07305 194 aaKnown RBP2.6□□□□□ -1.99
CD44-238ENST00000534296 HOXC8P31273 242 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 ACSL1P33121 698 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 DCTP40126 519 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 PSMC4P43686 418 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 AIMP1Q12904 312 aaKnown RBP2.6□□□□□ -1.99
CD44-238ENST00000534296 IRF3Q14653 427 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 SNAPC1Q16533 368 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 LETM2Q2VYF4 491 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 FAM98BQ52LJ0 330 aaKnown RBP2.6□□□□□ -1.99
CD44-238ENST00000534296 C9orf152Q5JTZ5 239 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 KRT79Q5XKE5 535 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 ALS2CLQ60I27 953 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 ADALQ6DHV7 355 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 PLXDC2Q6UX71 529 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 RBMS3Q6XE24 437 aaKnown RBP2.6□□□□□ -1.99
CD44-238ENST00000534296 CFAP77Q6ZQR2 320 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 Q75L30 129 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 KRT74Q7RTS7 529 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 TRPT1Q86TN4 253 aaKnown RBP2.6□□□□□ -1.99
CD44-238ENST00000534296 TSPAN33Q86UF1 283 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 KBTBD6Q86V97 674 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 PTOV1Q86YD1 416 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 CTCFLQ8NI51 663 aaPredicted RBP2.6□□□□□ -1.99
CD44-238ENST00000534296 TAS1R2Q8TE23 839 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 LPGAT1Q92604 370 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 ERP27Q96DN0 273 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 SPATA17Q96L03 361 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 LRR1Q96L50 414 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 DACH2Q96NX9 599 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 GCNAQ96QF7 691 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 ASCL2Q99929 193 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 HGH1Q9BTY7 390 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 PANK2Q9BZ23 570 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 SPATC1LQ9H0A9 340 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 SLC52A3Q9NQ40 469 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 ANKEF1Q9NU02 776 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 MTMR10Q9NXD2 777 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 KLHL9Q9P2J3 617 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 DDX25Q9UHL0 483 aaKnown RBP2.6□□□□□ -1.99
CD44-238ENST00000534296 TSPYL4Q9UJ04 414 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 KCNK7Q9Y2U2 307 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 GRIP1Q9Y3R0 1128 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 FAM169AQ9Y6X4 670 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 PASKQ96RG2 1323 aa2.6□□□□□ -1.99
CD44-238ENST00000534296 PRAG1Q86YV5 1406 aa2.59□□□□□ -1.99
CD44-238ENST00000534296 IGKV3D-15A0A087WSY6 115 aa2.59□□□□□ -1.99
CD44-238ENST00000534296 MED19A0JLT2 244 aaPredicted RBP2.59□□□□□ -1.99
CD44-238ENST00000534296 LNP1A1A4G5 178 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms