RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	PHF21B	Q96EK2	531 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.6	□□□□□ -1.67
ATM-223	ENST00000533979	FAM84B	Q96KN1	310 aa	Predicted RBP	4.6	□□□□□ -1.67
ATM-223	ENST00000533979	ZNF558	Q96NG5	402 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	EGFL8	Q99944	293 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	TEX13B	Q9BXU2	312 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.6	□□□□□ -1.67
ATM-223	ENST00000533979	DCLK3	Q9C098	648 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	TKTL2	Q9H0I9	626 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	MMP27	Q9H306	513 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	CNOT10	Q9H9A5	744 aa	Known RBP	4.6	□□□□□ -1.67
ATM-223	ENST00000533979	PIH1D3	Q9NQM4	214 aa	Known RBP	4.6	□□□□□ -1.67
ATM-223	ENST00000533979	CYP39A1	Q9NYL5	469 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	GRHL1	Q9NZI5	618 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	CWC15	Q9P013	229 aa	Known RBP	4.6	□□□□□ -1.67
ATM-223	ENST00000533979	SEPT10	Q9P0V9	454 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	IL17B	Q9UHF5	180 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	DDX25	Q9UHL0	483 aa	Known RBP	4.6	□□□□□ -1.67
ATM-223	ENST00000533979	FBXW11	Q9UKB1	542 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	CARD8	Q9Y2G2	431 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	MAU2	Q9Y6X3	613 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	RTEL1-TNFRSF6B	F6WH68	1400 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	CEP162	Q5TB80	1403 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	FAM135A	Q9P2D6	1515 aa		4.6	□□□□□ -1.67
ATM-223	ENST00000533979	TARSL2	A2RTX5	802 aa	Known RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	INAFM1	C9JVW0	142 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	RGS14	O43566	566 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	DDHD2	O94830	711 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	GLUD1	P00367	558 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	IL1A	P01583	271 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	UROS	P10746	265 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	CHRNB2	P17787	502 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	CCNA2	P20248	432 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	KCNA5	P22460	613 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	IL15	P40933	162 aa	Predicted RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	KDM5C	P41229	1560 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	RABIF	P47224	123 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	GLUD2	P49448	558 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	CYP2J2	P51589	502 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	ARSE	P51690	589 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	NAGLU	P54802	743 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	CASP9	P55211	416 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	SNU13	P55769	128 aa	Known RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	KIAA1024L	P59773	190 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	ABAT	P80404	500 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	CRYZ	Q08257	329 aa	Known RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	TRAF2	Q12933	501 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	GRIK3	Q13003	919 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	TRAF1	Q13077	416 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	GPS2	Q13227	327 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	TRIM29	Q14134	588 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	GPR18	Q14330	331 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	RPS6KA1	Q15418	735 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	C6orf136	Q5SQH8	315 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	FNBP1L	Q5T0N5	605 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	LRIF1	Q5T3J3	769 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	SFMBT2	Q5VUG0	894 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	TMEM198	Q66K66	360 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	ETFRF1	Q6IPR1	90 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	C18orf65	Q6ZTR6	163 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	ADIPOR2	Q86V24	386 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	CCDC25	Q86WR0	208 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	MFN1	Q8IWA4	741 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	CCDC13	Q8IYE1	715 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	DCP1B	Q8IZD4	617 aa	Known RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	CNNM3	Q8NE01	707 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	MYO3A	Q8NEV4	1616 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	CMAS	Q8NFW8	434 aa	Predicted RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	PSMA8	Q8TAA3	256 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	CEP76	Q8TAP6	659 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	FBXO30	Q8TB52	745 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	MOAP1	Q96BY2	351 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	TEFM	Q96QE5	360 aa	Known RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	FRG2B	Q96QU4	278 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	PARK7	Q99497	189 aa	Known RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	ABHD6	Q9BV23	337 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	KDM5D	Q9BY66	1539 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	CATSPERB	Q9H7T0	1116 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	MYO5C	Q9NQX4	1742 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	MYO6	Q9UM54	1294 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	CHKB	Q9Y259	395 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.59	□□□□□ -1.67
ATM-223	ENST00000533979	INSL5	Q9Y5Q6	135 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	PTGDR2	Q9Y5Y4	395 aa		4.59	□□□□□ -1.67
ATM-223	ENST00000533979	CDC42BPA	Q5VT25	1732 aa		4.58	□□□□□ -1.68
ATM-223	ENST00000533979	PREX2	Q70Z35	1606 aa		4.58	□□□□□ -1.68
ATM-223	ENST00000533979	GPATCH8	Q9UKJ3	1502 aa	Known RBP	4.58	□□□□□ -1.68
ATM-223	ENST00000533979	BCL9L	Q86UU0	1499 aa		4.58	□□□□□ -1.68
ATM-223	ENST00000533979	TNR	Q92752	1358 aa		4.58	□□□□□ -1.68
ATM-223	ENST00000533979		A0A1B0GVT2	93 aa		4.58	□□□□□ -1.68
ATM-223	ENST00000533979	C17orf102	A2RUQ5	167 aa		4.58	□□□□□ -1.68
ATM-223	ENST00000533979	SMIM30	A4D0T7	59 aa		4.58	□□□□□ -1.68
ATM-223	ENST00000533979	NOL3	O60936	208 aa	Known RBP	4.58	□□□□□ -1.68
ATM-223	ENST00000533979	GPC4	O75487	556 aa		4.58	□□□□□ -1.68
ATM-223	ENST00000533979	REC8	O95072	547 aa		4.58	□□□□□ -1.68

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