RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 SAMD4BQ5PRF9 694 aaKnown RBP27.91■■■□□ 2.06
SAMD1-202ENST00000533683 HENMT1Q5T8I9 393 aaKnown RBP27.91■■■□□ 2.06
SAMD1-202ENST00000533683 METTL2BQ6P1Q9 378 aaKnown RBP27.91■■■□□ 2.06
SAMD1-202ENST00000533683 ZFP1Q6P2D0 407 aa27.91■■■□□ 2.06
SAMD1-202ENST00000533683 DPPA4Q7L190 304 aa27.91■■■□□ 2.06
SAMD1-202ENST00000533683 VRK3Q8IV63 474 aa27.91■■■□□ 2.06
SAMD1-202ENST00000533683 ETFBKMTQ8IXQ9 262 aa27.91■■■□□ 2.06
SAMD1-202ENST00000533683 SPDL1Q96EA4 605 aa27.91■■■□□ 2.06
SAMD1-202ENST00000533683 PEX2P28328 305 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 HMOX2P30519 316 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 RCAN2Q14206 197 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 PDCD4Q53EL6 469 aaKnown RBP27.9■■■□□ 2.06
SAMD1-202ENST00000533683 C9orf50Q5SZB4 431 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 PQLC1Q8N2U9 271 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 KIAA1958Q8N8K9 716 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 TSPEARQ8WU66 669 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 NXPE3Q969Y0 559 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 EBF3Q9H4W6 596 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 CERS4Q9HA82 394 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 PRRT4C9JH25 899 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 CASQ2O14958 399 aaPredicted RBP27.9■■■□□ 2.06
SAMD1-202ENST00000533683 NUAK1O60285 661 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 SLC22A3O75751 556 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 ANXA5P08758 320 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 ST8SIA6P61647 398 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 ANO7Q6IWH7 933 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 UBE2R2Q712K3 238 aaPredicted RBP27.9■■■□□ 2.06
SAMD1-202ENST00000533683 NPAS3Q8IXF0 933 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 CHCHD4Q8N4Q1 142 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 TRAM1L1Q8N609 369 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 HCAR2Q8TDS4 363 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 HOPXQ9BPY8 73 aaPredicted RBP27.9■■■□□ 2.06
SAMD1-202ENST00000533683 ARL15Q9NXU5 204 aa27.9■■■□□ 2.06
SAMD1-202ENST00000533683 RANBP2P49792 3224 aaKnown RBP27.89■■■□□ 2.06
SAMD1-202ENST00000533683 OTOL1A6NHN0 477 aaPredicted RBP27.89■■■□□ 2.06
SAMD1-202ENST00000533683 FADS2P1A8MWK0 482 aa27.89■■■□□ 2.06
SAMD1-202ENST00000533683 FXYD1O00168 92 aa27.89■■■□□ 2.06
SAMD1-202ENST00000533683 SGTAO43765 313 aa27.89■■■□□ 2.06
SAMD1-202ENST00000533683 STK16O75716 305 aa27.89■■■□□ 2.06
SAMD1-202ENST00000533683 SLC6A11P48066 632 aa27.89■■■□□ 2.06
SAMD1-202ENST00000533683 ERVK-21P61565 698 aa27.89■■■□□ 2.06
SAMD1-202ENST00000533683 BOP1Q14137 746 aaKnown RBP27.89■■■□□ 2.06
SAMD1-202ENST00000533683 TRIP10Q15642 601 aa27.89■■■□□ 2.06
SAMD1-202ENST00000533683 COQ5Q5HYK3 327 aa27.89■■■□□ 2.06
SAMD1-202ENST00000533683 TECPR1Q7Z6L1 1165 aa27.89■■■□□ 2.06
SAMD1-202ENST00000533683 SPATA24Q86W54 205 aa27.89■■■□□ 2.06
SAMD1-202ENST00000533683 BPIFB1Q8TDL5 484 aa27.89■■■□□ 2.06
SAMD1-202ENST00000533683 ASB11Q8WXH4 323 aa27.89■■■□□ 2.06
SAMD1-202ENST00000533683 SLC12A9Q9BXP2 914 aa27.89■■■□□ 2.06
SAMD1-202ENST00000533683 C6orf203Q9P0P8 240 aaPredicted RBP27.89■■■□□ 2.06
SAMD1-202ENST00000533683 NFKBIL1Q9UBC1 381 aaPredicted RBP27.89■■■□□ 2.06
SAMD1-202ENST00000533683 A0A1W2PP18 115 aa27.89■■■□□ 2.05
SAMD1-202ENST00000533683 LSM1O15116 133 aaKnown RBP27.89■■■□□ 2.05
SAMD1-202ENST00000533683 MMP12P39900 470 aa27.89■■■□□ 2.05
SAMD1-202ENST00000533683 KCNK10P57789 538 aa27.89■■■□□ 2.05
SAMD1-202ENST00000533683 CDKL4Q5MAI5 379 aa27.89■■■□□ 2.05
SAMD1-202ENST00000533683 PARS2Q7L3T8 475 aaKnown RBP27.89■■■□□ 2.05
SAMD1-202ENST00000533683 ST13P5Q8NFI4 369 aaPredicted RBP27.89■■■□□ 2.05
SAMD1-202ENST00000533683 SKA2Q8WVK7 121 aaPredicted RBP27.89■■■□□ 2.05
SAMD1-202ENST00000533683 VPS33AQ96AX1 596 aa27.89■■■□□ 2.05
SAMD1-202ENST00000533683 ASB16Q96NS5 453 aa27.89■■■□□ 2.05
SAMD1-202ENST00000533683 NTMT1Q9BV86 223 aa27.89■■■□□ 2.05
SAMD1-202ENST00000533683 EPS15L1Q9UBC2 864 aa27.89■■■□□ 2.05
SAMD1-202ENST00000533683 CFAP99D6REC4 459 aa27.88■■■□□ 2.05
SAMD1-202ENST00000533683 EPB42P16452 691 aa27.88■■■□□ 2.05
SAMD1-202ENST00000533683 NRIP1P48552 1158 aa27.88■■■□□ 2.05
SAMD1-202ENST00000533683 PLEKHS1Q5SXH7 462 aa27.88■■■□□ 2.05
SAMD1-202ENST00000533683 ZNF648Q5T619 568 aaPredicted RBP27.88■■■□□ 2.05
SAMD1-202ENST00000533683 MINDY1Q8N5J2 469 aa27.88■■■□□ 2.05
SAMD1-202ENST00000533683 DDHD1Q8NEL9 900 aa27.88■■■□□ 2.05
SAMD1-202ENST00000533683 ZSCAN5AQ9BUG6 496 aa27.88■■■□□ 2.05
SAMD1-202ENST00000533683 KLHL4Q9C0H6 718 aa27.88■■■□□ 2.05
SAMD1-202ENST00000533683 PARVBQ9HBI1 364 aa27.88■■■□□ 2.05
SAMD1-202ENST00000533683 HEBP1Q9NRV9 189 aa27.88■■■□□ 2.05
SAMD1-202ENST00000533683 RAD18Q9NS91 495 aa27.88■■■□□ 2.05
SAMD1-202ENST00000533683 ZIM2Q9NZV7 527 aa27.88■■■□□ 2.05
SAMD1-202ENST00000533683 C2orf16Q68DN1 1984 aa27.88■■■□□ 2.05
SAMD1-202ENST00000533683 ASPDHA6ND91 283 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 C8GP07360 202 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 EMX2Q04743 252 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 TRAP1Q12931 704 aaKnown RBP27.87■■■□□ 2.05
SAMD1-202ENST00000533683 GRIN2CQ14957 1233 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 NR6A1Q15406 480 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 GAB4Q2WGN9 574 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 LIPIQ6XZB0 460 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 SAMD11Q96NU1 681 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 VCX3BQ9H321 246 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 RNF11Q9Y3C5 154 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 CCL27Q9Y4X3 112 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 LOC730098B7Z3J9 87 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 FFAR3O14843 346 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 GPR42O15529 346 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 MSH3P20585 1137 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 IL12AP29459 219 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 PIK3CGP48736 1102 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 ZXDCQ2QGD7 858 aaPredicted RBP27.87■■■□□ 2.05
SAMD1-202ENST00000533683 C6orf10Q5SRN2 563 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 BEND7Q8N7W2 519 aaPredicted RBP27.87■■■□□ 2.05
SAMD1-202ENST00000533683 VN1R2Q8NFZ6 395 aa27.87■■■□□ 2.05
SAMD1-202ENST00000533683 PROKR1Q8TCW9 393 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms