RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PPP1CAP62136 330 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 PRKAA1Q13131 559 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 RPA4Q13156 261 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 LY6DQ14210 128 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 RASGRP3Q8IV61 690 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 SIDT2Q8NBJ9 832 aaKnown RBP16.8■□□□□ 0.28
PHRF1-204ENST00000532550 PPHLN1Q8NEY8 458 aaKnown RBP16.8■□□□□ 0.28
PHRF1-204ENST00000532550 OR4E2Q8NGC2 313 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 OR13J1Q8NGT2 312 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 OR4L1Q8NH43 312 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 KIAA1143Q96AT1 154 aaPredicted RBP16.8■□□□□ 0.28
PHRF1-204ENST00000532550 ELMO2Q96JJ3 720 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 CD180Q99467 661 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 MAP3K3Q99759 626 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 ARHGAP9Q9BRR9 750 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 EFHD1Q9BUP0 239 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 PDE7BQ9NP56 450 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 SEMA5BQ9P283 1151 aa16.8■□□□□ 0.28
PHRF1-204ENST00000532550 IGHV5-51A0A0C4DH38 117 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 F8W8V4 182 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 AP3B1O00203 1094 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 GOT2P00505 430 aaKnown RBP16.79■□□□□ 0.28
PHRF1-204ENST00000532550 FTH1P02794 183 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 ITGB2P05107 769 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 OR56A5P0C7T3 313 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 LIFP15018 202 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 WT1P19544 449 aaPredicted RBP16.79■□□□□ 0.28
PHRF1-204ENST00000532550 PDHA2P29803 388 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 FOXN2P32314 431 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 PRAMEP78395 509 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 BASP1P80723 227 aaKnown RBP16.79■□□□□ 0.28
PHRF1-204ENST00000532550 FASTKD1Q53R41 847 aaKnown RBP16.79■□□□□ 0.28
PHRF1-204ENST00000532550 PCID2Q5JVF3 399 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 AFTPHQ6ULP2 937 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 CERS6Q6ZMG9 384 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 TIPARPQ7Z3E1 657 aaKnown RBP16.79■□□□□ 0.28
PHRF1-204ENST00000532550 KMT5CQ86Y97 462 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 ESX1Q8N693 406 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 PHC3Q8NDX5 983 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 ACVR1CQ8NER5 493 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 LCN9Q8WX39 176 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 ULBP3Q9BZM4 244 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 OR52A5Q9H2C5 316 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 GPN2Q9H9Y4 310 aaPredicted RBP16.79■□□□□ 0.28
PHRF1-204ENST00000532550 EIF2B3Q9NR50 452 aaKnown RBP16.79■□□□□ 0.28
PHRF1-204ENST00000532550 SLC2A6Q9UGQ3 507 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 ANAPC5Q9UJX4 755 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 JRKLQ9Y4A0 524 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 TCAF1Q9Y4C2 921 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 PRSS21Q9Y6M0 314 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 PIEZO2Q9H5I5 2752 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 ATMQ13315 3056 aa16.79■□□□□ 0.28
PHRF1-204ENST00000532550 TLCD2A6NGC4 264 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 LIN7AO14910 233 aaPredicted RBP16.78■□□□□ 0.28
PHRF1-204ENST00000532550 FGF5P12034 268 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 PREPP48147 710 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 NPY2RP49146 381 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 SESN2P58004 480 aaPredicted RBP16.78■□□□□ 0.28
PHRF1-204ENST00000532550 CYP4F2P78329 520 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 ABHD18Q0P651 414 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 C6orf15Q6UXA7 325 aaPredicted RBP16.78■□□□□ 0.28
PHRF1-204ENST00000532550 PACS1Q6VY07 963 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 BPHLQ86WA6 291 aaPredicted RBP16.78■□□□□ 0.28
PHRF1-204ENST00000532550 PPP1R3BQ86XI6 285 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 ELMO1Q92556 727 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 TFGQ92734 400 aaPredicted RBP16.78■□□□□ 0.28
PHRF1-204ENST00000532550 EXTL1Q92935 676 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 PEX13Q92968 403 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 SLC41A2Q96JW4 573 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 ZNF778Q96MU6 729 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 SLC12A9Q9BXP2 914 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 SRMSQ9H3Y6 488 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 MVB12BQ9H7P6 319 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 GRPEL1Q9HAV7 217 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 CHRAC1Q9NRG0 131 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 BFARQ9NZS9 450 aa16.78■□□□□ 0.28
PHRF1-204ENST00000532550 LOC101059948A0A1B0GTJ6 334 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 SPAG6O75602 509 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 DLGAP3O95886 979 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 CCNYL3P0C7X3 344 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 POLR2CP19387 275 aaPredicted RBP16.77■□□□□ 0.28
PHRF1-204ENST00000532550 HSD11B2P80365 405 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 PLOD1Q02809 727 aaPredicted RBP16.77■□□□□ 0.28
PHRF1-204ENST00000532550 ACY1Q03154 408 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 ACVR1Q04771 509 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 MAP7Q14244 749 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 BRD3Q15059 726 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.77■□□□□ 0.28
PHRF1-204ENST00000532550 ZNF658BQ4V348 819 aaPredicted RBP16.77■□□□□ 0.28
PHRF1-204ENST00000532550 TMTC4Q5T4D3 741 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 UNC5BQ8IZJ1 945 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 ZNF843Q8N446 348 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 MED8Q96G25 268 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 PBKQ96KB5 322 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 IL22Q9GZX6 179 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 TFB2MQ9H5Q4 396 aaKnown RBP16.77■□□□□ 0.28
PHRF1-204ENST00000532550 RARRES3Q9UL19 164 aa16.77■□□□□ 0.28
PHRF1-204ENST00000532550 COL6A6A6NMZ7 2263 aa16.77■□□□□ 0.27
PHRF1-204ENST00000532550 ZNF891A8MT65 544 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-204ENST00000532550 MATN2O00339 956 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms