RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 TDRD1Q9BXT4 1180 aaKnown RBP15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 ZNF232Q9UNY5 417 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 USP3Q9Y6I4 520 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 GMFGO60234 142 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 PRAMEF12O95522 483 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 SNRPB2P08579 225 aaKnown RBP15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 OXTRP30559 389 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 CSTF2P33240 577 aaKnown RBP eCLIP15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 TDGQ13569 410 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 SQLEQ14534 574 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 SLC9B2Q86UD5 537 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 NPAS3Q8IXF0 933 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 OR4A15Q8NGL6 344 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 BCL7CQ8WUZ0 217 aaPredicted RBP15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 NELL1Q92832 810 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 GLYATL1Q969I3 302 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 CDK15Q96Q40 435 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 MIPEPQ99797 713 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 FAM83CQ9BQN1 747 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 SLC17A9Q9BYT1 436 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 MAGEE1Q9HCI5 957 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 ZNF446Q9NWS9 450 aa15.46■□□□□ 0.07
PPFIA1-222ENST00000532504 GTPBP1O00178 669 aaKnown RBP15.46■□□□□ 0.06
PPFIA1-222ENST00000532504 MED21Q13503 144 aa15.46■□□□□ 0.06
PPFIA1-222ENST00000532504 BEND5Q7L4P6 421 aa15.46■□□□□ 0.06
PPFIA1-222ENST00000532504 GATAD2AQ86YP4 633 aa15.46■□□□□ 0.06
PPFIA1-222ENST00000532504 ST13P4Q8IZP2 240 aaPredicted RBP15.46■□□□□ 0.06
PPFIA1-222ENST00000532504 RNF145Q96MT1 663 aa15.46■□□□□ 0.06
PPFIA1-222ENST00000532504 XKR8Q9H6D3 395 aa15.46■□□□□ 0.06
PPFIA1-222ENST00000532504 DDX18Q9NVP1 670 aaKnown RBP15.46■□□□□ 0.06
PPFIA1-222ENST00000532504 APOBEC3BQ9UH17 382 aaKnown RBP15.46■□□□□ 0.06
PPFIA1-222ENST00000532504 GTF2A1LQ9UNN4 478 aa15.46■□□□□ 0.06
PPFIA1-222ENST00000532504 TRIM24O15164 1050 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 LILRB3O75022 631 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 OCA2Q04671 838 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 SLC13A2Q13183 592 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 TBCELQ5QJ74 424 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 DHFR2Q86XF0 187 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 C19orf60Q96EN9 201 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 GAL3ST4Q96RP7 486 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 NLE1Q9NVX2 485 aaPredicted RBP15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 MAPRE3Q9UPY8 281 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 C9JVG2 144 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 PLIN3O60664 434 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 SIX3O95343 332 aaPredicted RBP15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 POLR2CP19387 275 aaPredicted RBP15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 MAGEA9P43362 315 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 CLK3P49761 638 aaKnown RBP15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 STC1P52823 247 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 STXBP1P61764 594 aaKnown RBP15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 DGKKQ5KSL6 1271 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 MFSD6LQ8IWD5 586 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 PGAP3Q96FM1 320 aaPredicted RBP15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 RBM18Q96H35 190 aaKnown RBP15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 USP29Q9HBJ7 922 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 ARHGEF3Q9NR81 526 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 ZNF487B1APH4 448 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 CDC7O00311 574 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 ALBP02768 609 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 EFNA1P20827 205 aaPredicted RBP15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 NOS3P29474 1203 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 GSSP48637 474 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 LSM12Q3MHD2 195 aaKnown RBP15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 PRAMEF13Q5VWM6 474 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 MLIPQ5VWP3 458 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 ICE2Q659A1 982 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 PRMT9Q6P2P2 845 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 FBXO30Q8TB52 745 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 FOXJ1Q92949 421 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 RTP3Q9BQQ7 232 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 CNPPD1Q9BV87 410 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 RETREG1Q9H6L5 497 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 VPS4AQ9UN37 437 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 CLCN4P51793 760 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 RAB41Q5JT25 222 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 NCEH1Q6PIU2 408 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 CHMP1BQ7LBR1 199 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 NACC2Q96BF6 587 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 GATA5Q9BWX5 397 aaPredicted RBP15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 THEGQ9P2T0 379 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 LEF1Q9UJU2 399 aaPredicted RBP15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 SLC22A14Q9Y267 594 aa15.45■□□□□ 0.06
PPFIA1-222ENST00000532504 TAF1LQ8IZX4 1826 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 LATO43561 262 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 F11P03951 625 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 PTPN4P29074 926 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 SLBPQ14493 270 aaKnown RBP eCLIP15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 SUSD1Q6UWL2 747 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 PNPT1Q8TCS8 783 aaKnown RBP15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 NPC1O15118 1278 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 ABLIM3O94929 683 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 LAMP2P13473 410 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 AVPR1BP47901 424 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 EGFLAMQ63HQ2 1017 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 GPR149Q86SP6 731 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 ALYREFQ86V81 257 aaKnown RBP15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 SLC43A3Q8NBI5 491 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 HSFX1Q9UBD0 423 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 SLC22A3O75751 556 aa15.44■□□□□ 0.06
PPFIA1-222ENST00000532504 THEGLP0DJG4 465 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms