RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 SPIBQ01892 262 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 SLC44A4Q53GD3 710 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 LYSMD3Q7Z3D4 306 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 TDHQ8IZJ6 230 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 ZNF671Q8TAW3 534 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 DCUN1D5Q9BTE7 237 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 DGCR6LQ9BY27 220 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 SIX2Q9NPC8 291 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 TMEM248Q9NWD8 314 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 GDE1Q9NZC3 331 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 PACSIN3Q9UKS6 424 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 HCN4Q9Y3Q4 1203 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 WBP4O75554 376 aaKnown RBP11.13□□□□□ -0.63
PTPRK-221ENST00000532331 OAZ2O95190 189 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 NMBRP28336 390 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 MAPK12P53778 367 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 USP46P62068 366 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 NXNL1Q96CM4 212 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 MFSD3Q96ES6 412 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 TUBGCP5Q96RT8 1024 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 HOPXQ9BPY8 73 aaPredicted RBP11.13□□□□□ -0.63
PTPRK-221ENST00000532331 KCNS3Q9BQ31 491 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 NFKBIL1Q9UBC1 381 aaPredicted RBP11.13□□□□□ -0.63
PTPRK-221ENST00000532331 SAMHD1Q9Y3Z3 626 aaKnown RBP11.13□□□□□ -0.63
PTPRK-221ENST00000532331 TCRBV7S2A1N4TA0A589 114 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 DHRS12A0PJE2 317 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 OR10H3O60404 316 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 TPP2P29144 1249 aaPredicted RBP11.13□□□□□ -0.63
PTPRK-221ENST00000532331 HSPA7P48741 367 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 NTHL1P78549 312 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 ZNF783Q6ZMS7 281 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 BPIFB6Q8NFQ5 453 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 HCAR2Q8TDS4 363 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 MYDGFQ969H8 173 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 APOLD1Q96LR9 279 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 LRTM1Q9HBL6 345 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 PRDM8Q9NQV8 689 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 UGT1A9O60656 530 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 UGT1A6P19224 532 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 UGT1A1P22309 533 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 UGT1A4P22310 534 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 MPSTP25325 297 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 IL12BP29460 328 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 HOXA11P31270 313 aaPredicted RBP11.13□□□□□ -0.63
PTPRK-221ENST00000532331 UGT1A3P35503 534 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 UGT1A5P35504 534 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 NRLP54845 237 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 CHIT1Q13231 466 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 TRIM25Q14258 630 aaKnown RBP11.13□□□□□ -0.63
PTPRK-221ENST00000532331 ACAP2Q15057 778 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 TIGD2Q4W5G0 525 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 MLIPQ5VWP3 458 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 OLFML1Q6UWY5 402 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 TMEM139Q8IV31 216 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 LRRC57Q8N9N7 239 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 RTKNQ9BST9 563 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 TPSD1Q9BZJ3 242 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 IPPKQ9H8X2 491 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 UGT1A7Q9HAW7 530 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 UGT1A10Q9HAW8 530 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 UGT1A8Q9HAW9 530 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 MAGEL2Q9UJ55 1249 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 ZNF180Q9UJW8 692 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 A0A0J9YYE9 177 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 PRG2P13727 222 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 TTKP33981 857 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 ASMTP46597 345 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 LIMK2P53671 638 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 ZIK1Q3SY52 487 aaPredicted RBP11.13□□□□□ -0.63
PTPRK-221ENST00000532331 RABEPKQ7Z6M1 372 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 SMYD1Q8NB12 490 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 MPP4Q96JB8 637 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 KLHL25Q9H0H3 589 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 TSC22D4Q9Y3Q8 395 aa11.13□□□□□ -0.63
PTPRK-221ENST00000532331 UBR2Q8IWV8 1755 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 GABRDO14764 452 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 NRP2O60462 931 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 POP7O75817 140 aaKnown RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 FAM155BO75949 473 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 DRD1P21728 446 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 C2orf80Q0P641 193 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 LMAN2Q12907 356 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 ABRAXAS1Q6UWZ7 409 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 CRELD2Q6UXH1 353 aaPredicted RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 TAS1R3Q7RTX0 852 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 TEFMQ96QE5 360 aaKnown RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 GRIP2Q9C0E4 1043 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 RACGAP1Q9H0H5 632 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 EIF2B3Q9NR50 452 aaKnown RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 GEMIN8Q9NWZ8 242 aaKnown RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 SERTAD3Q9UJW9 196 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 KCNK6Q9Y257 313 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 RNGTTO60942 597 aaKnown RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 SRPRAP08240 638 aaKnown RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 CPN2P22792 545 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 HADHBP55084 474 aaKnown RBP11.12□□□□□ -0.63
PTPRK-221ENST00000532331 RING1Q06587 406 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 DGCR6Q14129 220 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 LPAL2Q16609 132 aa11.12□□□□□ -0.63
PTPRK-221ENST00000532331 ZNF805Q5CZA5 627 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms