RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 HLA-DPA1P20036 260 aa19.26■□□□□ 0.67
HIPK3-205ENST00000531504 DEKP35659 375 aaKnown RBP19.26■□□□□ 0.67
HIPK3-205ENST00000531504 PREPP48147 710 aa19.26■□□□□ 0.67
HIPK3-205ENST00000531504 CCZ1BP86790 482 aa19.26■□□□□ 0.67
HIPK3-205ENST00000531504 CCZ1P86791 482 aaPredicted RBP19.26■□□□□ 0.67
HIPK3-205ENST00000531504 ATP13A5Q4VNC0 1218 aa19.26■□□□□ 0.67
HIPK3-205ENST00000531504 ZNF571Q7Z3V5 609 aaPredicted RBP19.26■□□□□ 0.67
HIPK3-205ENST00000531504 BEND7Q8N7W2 519 aaPredicted RBP19.26■□□□□ 0.67
HIPK3-205ENST00000531504 NIPA2Q8N8Q9 360 aa19.26■□□□□ 0.67
HIPK3-205ENST00000531504 CCNYQ8ND76 341 aa19.26■□□□□ 0.67
HIPK3-205ENST00000531504 OR1L3Q8NH93 324 aa19.26■□□□□ 0.67
HIPK3-205ENST00000531504 CCDC42Q96M95 316 aa19.26■□□□□ 0.67
HIPK3-205ENST00000531504 TRIB3Q96RU7 358 aa19.26■□□□□ 0.67
HIPK3-205ENST00000531504 NHEJ1Q9H9Q4 299 aaPredicted RBP19.26■□□□□ 0.67
HIPK3-205ENST00000531504 SLC24A2Q9UI40 661 aa19.26■□□□□ 0.67
HIPK3-205ENST00000531504 CFAP20Q9Y6A4 193 aaKnown RBP19.26■□□□□ 0.67
HIPK3-205ENST00000531504 DNMT3AQ9Y6K1 912 aaPredicted RBP19.26■□□□□ 0.67
HIPK3-205ENST00000531504 CSMD2Q7Z408 3487 aa19.26■□□□□ 0.67
HIPK3-205ENST00000531504 PCM1Q15154 2024 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 ZGRF1Q86YA3 2104 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 SLC9B1P1A6NJY1 282 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 E7EQ34 232 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 E2F3O00716 465 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 KLF7O75840 302 aaPredicted RBP19.25■□□□□ 0.67
HIPK3-205ENST00000531504 CD63P08962 238 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 CA5AP35218 305 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 PTGER4P35408 488 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 FOLR3P41439 243 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 SOX8P57073 446 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 ZNF789Q5FWF6 425 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 FBXO38Q6PIJ6 1188 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 CCDC170Q8IYT3 715 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 FAM71BQ8TC56 605 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 PPP4R1Q8TF05 950 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 HDAC11Q96DB2 347 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 C12orf66Q96MD2 445 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 KCNF1Q9H3M0 494 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 DEF6Q9H4E7 631 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 KIR3DX1Q9H7L2 352 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 GPN3Q9UHW5 284 aaPredicted RBP19.25■□□□□ 0.67
HIPK3-205ENST00000531504 POMT2Q9UKY4 750 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 TMPRSS11EQ9UL52 423 aa19.25■□□□□ 0.67
HIPK3-205ENST00000531504 SOWAHDA6NJG2 315 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 CD48P09326 243 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 CYLC1P35663 651 aaPredicted RBP19.24■□□□□ 0.67
HIPK3-205ENST00000531504 ARCN1P48444 511 aaKnown RBP19.24■□□□□ 0.67
HIPK3-205ENST00000531504 NFE2L1Q14494 772 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 ASTE1Q2TB18 679 aaPredicted RBP19.24■□□□□ 0.67
HIPK3-205ENST00000531504 KRTAP21-3Q3LHN1 58 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 LDLRAP1Q5SW96 308 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 ZFYVE27Q5T4F4 411 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 CCDC70Q6NSX1 233 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 SPOCD1Q6ZMY3 1216 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 FAM83HQ6ZRV2 1179 aaPredicted RBP19.24■□□□□ 0.67
HIPK3-205ENST00000531504 GRHL3Q8TE85 626 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 PPM1MQ96MI6 270 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 ZNF830Q96NB3 372 aaPredicted RBP19.24■□□□□ 0.67
HIPK3-205ENST00000531504 ZNF670Q9BS34 389 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 ATP13A2Q9NQ11 1180 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 P4HTMQ9NXG6 502 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 IP6K2Q9UHH9 426 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 NOVA2Q9UNW9 492 aaKnown RBP19.24■□□□□ 0.67
HIPK3-205ENST00000531504 PTRH2Q9Y3E5 179 aaKnown RBP19.24■□□□□ 0.67
HIPK3-205ENST00000531504 KLF2Q9Y5W3 355 aaPredicted RBP19.24■□□□□ 0.67
HIPK3-205ENST00000531504 FER1L5A0AVI2 2057 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 NUP210LQ5VU65 1888 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 SVILO95425 2214 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 HIVEP1P15822 2718 aa19.24■□□□□ 0.67
HIPK3-205ENST00000531504 KCNK1O00180 336 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 DDX3YO15523 660 aaKnown RBP19.23■□□□□ 0.67
HIPK3-205ENST00000531504 AKR1B10O60218 316 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 STSP08842 583 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 POLR2CP19387 275 aaPredicted RBP19.23■□□□□ 0.67
HIPK3-205ENST00000531504 NDUFS1P28331 727 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 SSR1P43307 286 aaKnown RBP19.23■□□□□ 0.67
HIPK3-205ENST00000531504 TSFMP43897 325 aaKnown RBP19.23■□□□□ 0.67
HIPK3-205ENST00000531504 ART3Q13508 389 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 DPYSL3Q14195 570 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 CYP2A13Q16696 494 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 HADHQ16836 314 aaKnown RBP19.23■□□□□ 0.67
HIPK3-205ENST00000531504 MLIPQ5VWP3 458 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 ZDHHC20Q5W0Z9 365 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 METRNLQ641Q3 311 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 RAD9BQ6WBX8 426 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 B4GALNT4Q76KP1 1039 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 FJX1Q86VR8 437 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 GPR135Q8IZ08 494 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 RASGEF1AQ8N9B8 481 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 FAR1Q8WVX9 515 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 LURAP1Q96LR2 239 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 TRAPPC9Q96Q05 1148 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 INSM2Q96T92 566 aaPredicted RBP19.23■□□□□ 0.67
HIPK3-205ENST00000531504 WWP1Q9H0M0 922 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 ACSL5Q9ULC5 683 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 COLEC10Q9Y6Z7 277 aa19.23■□□□□ 0.67
HIPK3-205ENST00000531504 KLHL33A6NCF5 533 aa19.22■□□□□ 0.67
HIPK3-205ENST00000531504 DDX3XO00571 662 aaKnown RBP eCLIP19.22■□□□□ 0.67
HIPK3-205ENST00000531504 ZNF749O43361 778 aa19.22■□□□□ 0.67
HIPK3-205ENST00000531504 SLC35G4P0C7Q5 338 aa19.22■□□□□ 0.67
HIPK3-205ENST00000531504 PBLDP30039 288 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms