RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 TRIB3Q96RU7 358 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 SRPK1Q96SB4 655 aaKnown RBP8.98□□□□□ -0.97
NEDD8-206ENST00000531430 ZNF670Q9BS34 389 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 GLOD4Q9HC38 313 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 ZBTB20Q9HC78 741 aaPredicted RBP8.98□□□□□ -0.97
NEDD8-206ENST00000531430 IL26Q9NPH9 171 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 ATP13A2Q9NQ11 1180 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 C1GALT1Q9NS00 363 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 TMEM63CQ9P1W3 806 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 IFT80Q9P2H3 777 aaPredicted RBP8.98□□□□□ -0.97
NEDD8-206ENST00000531430 NDOR1Q9UHB4 597 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 NTNG1Q9Y2I2 539 aa8.98□□□□□ -0.97
NEDD8-206ENST00000531430 DNMT3AQ9Y6K1 912 aaPredicted RBP8.98□□□□□ -0.97
NEDD8-206ENST00000531430 CCDC66A2RUB6 948 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 LRRD1A4D1F6 860 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 MGAT4DA6NG13 374 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 APOL1O14791 398 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 KLHL41O60662 606 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 ZG16O60844 167 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 CYP1A2P05177 515 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 CAPN1P07384 714 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 SNRPB2P08579 225 aaKnown RBP8.97□□□□□ -0.97
NEDD8-206ENST00000531430 HBQ1P09105 142 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 CBSLP0DN79 551 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 ST6GAL1P15907 406 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 ALAS2P22557 587 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 PRDX3P30048 256 aaKnown RBP8.97□□□□□ -0.97
NEDD8-206ENST00000531430 RORAP35398 523 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 CBSP35520 551 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 FOXL2P58012 376 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 IFI35P80217 286 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-206ENST00000531430 PPIDQ08752 370 aaKnown RBP8.97□□□□□ -0.97
NEDD8-206ENST00000531430 PRKG2Q13237 762 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 MESDQ14696 234 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 PTPRCAPQ14761 206 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 PDK1Q15118 436 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 HIF1AQ16665 826 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 CYP2A13Q16696 494 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 ANO6Q4KMQ2 910 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 DCAF10Q5QP82 559 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 FAM198BQ6UWH4 519 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 ZNF517Q6ZMY9 492 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-206ENST00000531430 CUZD1Q86UP6 607 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 FJX1Q86VR8 437 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 MCEMP1Q8IX19 187 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 ZNF398Q8TD17 642 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 UBE2Q2Q8WVN8 375 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 DCUN1D1Q96GG9 259 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 RBM41Q96IZ5 413 aaKnown RBP8.97□□□□□ -0.97
NEDD8-206ENST00000531430 GBP5Q96PP8 586 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 NRTNQ99748 197 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 XPO4Q9C0E2 1151 aaKnown RBP8.97□□□□□ -0.97
NEDD8-206ENST00000531430 SPRTNQ9H040 489 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-206ENST00000531430 XKR8Q9H6D3 395 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 ZNF552Q9H707 407 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-206ENST00000531430 SYTL2Q9HCH5 934 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 LATS2Q9NRM7 1088 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 P4HTMQ9NXG6 502 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 NFKBIL1Q9UBC1 381 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-206ENST00000531430 ACSL5Q9ULC5 683 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 PKP3Q9Y446 797 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 ANKRD17O75179 2603 aaKnown RBP8.97□□□□□ -0.97
NEDD8-206ENST00000531430 CCDC88CQ9P219 2028 aa8.97□□□□□ -0.97
NEDD8-206ENST00000531430 SVILO95425 2214 aa8.96□□□□□ -0.97
NEDD8-206ENST00000531430 A0A087X0T9 212 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 A0A0A6YYK5 440 aaPredicted RBP8.96□□□□□ -0.98
NEDD8-206ENST00000531430 PPP1R12AO14974 1030 aaPredicted RBP8.96□□□□□ -0.98
NEDD8-206ENST00000531430 STX7O15400 261 aaKnown RBP8.96□□□□□ -0.98
NEDD8-206ENST00000531430 ALOX12BO75342 701 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 OR2B3O76000 313 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 IPO13O94829 963 aaKnown RBP8.96□□□□□ -0.98
NEDD8-206ENST00000531430 PROSCO94903 275 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 SERPINC1P01008 464 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 IGHEP01854 428 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 FAM228BP0C875 321 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 NDUFS1P28331 727 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 HMGCLP35914 325 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 CHRNA4P43681 627 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 WNT3AP56704 352 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 DMPKQ09013 629 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 CDC16Q13042 620 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 ITGA9Q13797 1035 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 ZRSR2Q15696 482 aaKnown RBP8.96□□□□□ -0.98
NEDD8-206ENST00000531430 SIRPB2Q5JXA9 342 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 IRAK1BP1Q5VVH5 260 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 ZDHHC20Q5W0Z9 365 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 ALKBH5Q6P6C2 394 aaKnown RBP8.96□□□□□ -0.98
NEDD8-206ENST00000531430 SPOCD1Q6ZMY3 1216 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 GLT6D1Q7Z4J2 308 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 MRGPREQ86SM8 312 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 DAAM2Q86T65 1068 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 KCNMB4Q86W47 210 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 LILRA3Q8N6C8 439 aaPredicted RBP8.96□□□□□ -0.98
NEDD8-206ENST00000531430 ST6GALNAC3Q8NDV1 305 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 GRHL3Q8TE85 626 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 ZFPM2Q8WW38 1151 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 INPP5DQ92835 1189 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 RNF25Q96BH1 459 aaPredicted RBP8.96□□□□□ -0.98
NEDD8-206ENST00000531430 PTERQ96BW5 349 aa8.96□□□□□ -0.98
NEDD8-206ENST00000531430 NAP1L5Q96NT1 182 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms