RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 FAM8A1Q9UBU6 413 aa14.97□□□□□ -0.01
CCS-206ENST00000530961 RALGAPA1Q6GYQ0 2036 aa14.97□□□□□ -0.01
CCS-206ENST00000530961 KNL1Q8NG31 2342 aa14.97□□□□□ -0.01
CCS-206ENST00000530961 ADAMTS20P59510 1910 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 TCRBV9S1A1TA0A576 114 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 SLC5A10A0PJK1 596 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 IQCF5A8MTL0 148 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 IFRD1O00458 451 aaPredicted RBP14.96□□□□□ -0.01
CCS-206ENST00000530961 PPM1DO15297 605 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 GPC4O75487 556 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 AHSGP02765 367 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 CHRM3P20309 590 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 AOAHP28039 575 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 CCR7P32248 378 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 STX2P32856 288 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 SLC19A1P41440 591 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 GPX6P59796 221 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 UBE2IP63279 158 aaKnown RBP14.96□□□□□ -0.01
CCS-206ENST00000530961 MPP1Q00013 466 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 NR1D2Q14995 579 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 SLMAPQ14BN4 828 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 TMED2Q15363 201 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 RPE65Q16518 533 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 SYTL3Q4VX76 610 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 ZNF789Q5FWF6 425 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.96□□□□□ -0.01
CCS-206ENST00000530961 XKR5Q6UX68 686 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 OTOAQ7RTW8 1153 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 LILRA3Q8N6C8 439 aaPredicted RBP14.96□□□□□ -0.01
CCS-206ENST00000530961 ZFPM2Q8WW38 1151 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 KCNJ9Q92806 393 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 CCDC74AQ96AQ1 378 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 CXorf40BQ96DE9 158 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 CCDC3Q9BQI4 270 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 WWP1Q9H0M0 922 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 OR52A5Q9H2C5 316 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 CORO1CQ9ULV4 474 aaPredicted RBP14.96□□□□□ -0.01
CCS-206ENST00000530961 NFU1Q9UMS0 254 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 PSMD13Q9UNM6 376 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 HEBP2Q9Y5Z4 205 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 COLEC10Q9Y6Z7 277 aa14.96□□□□□ -0.01
CCS-206ENST00000530961 OR52A4PA6NMU1 304 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 E5RI56 91 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 OPA1O60313 960 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 SLCO2B1O94956 709 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 ITGB6P18564 788 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 NDUFS1P28331 727 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 GABRB3P28472 473 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 PDHA2P29803 388 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 PHBP35232 272 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 HSPA14Q0VDF9 509 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 BOP1Q14137 746 aaKnown RBP14.95□□□□□ -0.02
CCS-206ENST00000530961 CCDC157Q569K6 752 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 PERM1Q5SV97 790 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 PLEKHS1Q5SXH7 462 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 CNSTQ6PJW8 725 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 CAPN12Q6ZSI9 719 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 KRT222Q8N1A0 295 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCS-206ENST00000530961 C12orf66Q96MD2 445 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 BBC3Q96PG8 261 aaPredicted RBP14.95□□□□□ -0.02
CCS-206ENST00000530961 INSM2Q96T92 566 aaPredicted RBP14.95□□□□□ -0.02
CCS-206ENST00000530961 SLC38A3Q99624 504 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 AARSD1Q9BTE6 412 aaKnown RBP14.95□□□□□ -0.02
CCS-206ENST00000530961 SLC40A1Q9NP59 571 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 NEUROG3Q9Y4Z2 214 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 WDFY3Q8IZQ1 3526 aa14.95□□□□□ -0.02
CCS-206ENST00000530961 LAMA1P25391 3075 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 FAM159BA6NKW6 160 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 NIPSNAP2O75323 286 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 MTHFD1P11586 935 aaKnown RBP14.94□□□□□ -0.02
CCS-206ENST00000530961 CD9P21926 228 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 ALDH4A1P30038 563 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 SKIV2L2P42285 1042 aaKnown RBP14.94□□□□□ -0.02
CCS-206ENST00000530961 PI4KAP42356 2102 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 PREPP48147 710 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 EPHA4P54764 986 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 KYNUQ16719 465 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 CLPPQ16740 277 aaPredicted RBP14.94□□□□□ -0.02
CCS-206ENST00000530961 COL28A1Q2UY09 1125 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 TTLL9Q3SXZ7 439 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 UGT3A1Q6NUS8 523 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 ZNF549Q6P9A3 640 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 DHRS13Q6UX07 377 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 TMEM26Q6ZUK4 368 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 SPRED1Q7Z699 444 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 SLC22A15Q8IZD6 547 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 CACTIN-AS1Q8N1I8 211 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 SPDYE1Q8NFV5 336 aaPredicted RBP14.94□□□□□ -0.02
CCS-206ENST00000530961 LKAAEAR1Q8TD35 194 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 TFGQ92734 400 aaPredicted RBP14.94□□□□□ -0.02
CCS-206ENST00000530961 RMDN2Q96LZ7 410 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 EPB41L1Q9H4G0 881 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 IMP3Q9NV31 184 aaKnown RBP14.94□□□□□ -0.02
CCS-206ENST00000530961 TXNDC16Q9P2K2 825 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 MYO18BQ8IUG5 2567 aa14.94□□□□□ -0.02
CCS-206ENST00000530961 USP9XQ93008 2570 aaPredicted RBP14.93□□□□□ -0.02
CCS-206ENST00000530961 DOCK9Q9BZ29 2069 aa14.93□□□□□ -0.02
CCS-206ENST00000530961 LILRA5A6NI73 299 aa14.93□□□□□ -0.02
CCS-206ENST00000530961 B4GAT1O43505 415 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms