RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 ZNF789Q5FWF6 425 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 LYPLAL1Q5VWZ2 237 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 IRGCQ6NXR0 463 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 CERS6Q6ZMG9 384 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 ARHGAP22Q7Z5H3 698 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 CLEC14AQ86T13 490 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 FAM129CQ86XR2 697 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 VRK3Q8IV63 474 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 UNC5BQ8IZJ1 945 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 SIGLEC10Q96LC7 697 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 FERD3LQ96RJ6 166 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 KRT12Q99456 494 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 TUBB2BQ9BVA1 445 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 VPS37BQ9H9H4 285 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 XAB2Q9HCS7 855 aaKnown RBP18.26■□□□□ 0.51
GMDS-208ENST00000530927 RRAGDQ9NQL2 400 aaPredicted RBP18.26■□□□□ 0.51
GMDS-208ENST00000530927 SLC24A2Q9UI40 661 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 ANAPC5Q9UJX4 755 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 MN1Q10571 1320 aaPredicted RBP18.26■□□□□ 0.51
GMDS-208ENST00000530927 LOC400499M0QZD8 3231 aa18.26■□□□□ 0.51
GMDS-208ENST00000530927 A0A087WV48 116 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 SDR42E2A6NKP2 422 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 EFCAB7A8K855 629 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 BHMG1C9JSJ3 638 aaPredicted RBP18.25■□□□□ 0.51
GMDS-208ENST00000530927 HGSO14964 777 aaPredicted RBP18.25■□□□□ 0.51
GMDS-208ENST00000530927 URI1O94763 535 aaPredicted RBP18.25■□□□□ 0.51
GMDS-208ENST00000530927 C9P02748 559 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 FTH1P02794 183 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 OR56A5P0C7T3 313 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 PAFAH1B1P43034 410 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 SEPHS1P49903 392 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 PCBP4P57723 403 aaKnown RBP18.25■□□□□ 0.51
GMDS-208ENST00000530927 PRKG2Q13237 762 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 DHX34Q14147 1143 aaKnown RBP18.25■□□□□ 0.51
GMDS-208ENST00000530927 COL28A1Q2UY09 1125 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 KIAA0930Q6ICG6 404 aaPredicted RBP18.25■□□□□ 0.51
GMDS-208ENST00000530927 RBM12BQ8IXT5 1001 aaKnown RBP18.25■□□□□ 0.51
GMDS-208ENST00000530927 ART4Q93070 314 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 FAM136AQ96C01 138 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 C9orf72Q96LT7 481 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 CTRCQ99895 268 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 TRIM31Q9BZY9 425 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 P2RY12Q9H244 342 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 SAMD15Q9P1V8 674 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 MAD1L1Q9Y6D9 718 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 RPS6KL1Q9Y6S9 549 aa18.25■□□□□ 0.51
GMDS-208ENST00000530927 ZCWPW2A0A1B0GU75 182 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 FAM237BA0A1B0GVD1 139 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 UBA6A0AVT1 1052 aaPredicted RBP18.24■□□□□ 0.51
GMDS-208ENST00000530927 SLC5A10A0PJK1 596 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 KLHL33A6NCF5 533 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 CSTF2P33240 577 aaKnown RBP eCLIP18.24■□□□□ 0.517e-7■■■□□ 18.8
GMDS-208ENST00000530927 EIF3BP55884 814 aaKnown RBP18.24■□□□□ 0.51
GMDS-208ENST00000530927 DHX9Q08211 1270 aaKnown RBP18.24■□□□□ 0.51
GMDS-208ENST00000530927 C2orf54Q08AI8 447 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 SRSF6Q13247 344 aaKnown RBP18.24■□□□□ 0.51
GMDS-208ENST00000530927 TRA2AQ13595 282 aaKnown RBP eCLIP18.24■□□□□ 0.519e-7■■■■■ 34.7
GMDS-208ENST00000530927 TGIF1Q15583 401 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 CTSL3PQ5NE16 218 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 HP1BP3Q5SSJ5 553 aaPredicted RBP18.24■□□□□ 0.51
GMDS-208ENST00000530927 PDZD3Q86UT5 571 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 ZFAND4Q86XD8 727 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 PLXDC1Q8IUK5 500 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 IGDCC3Q8IVU1 814 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 SPACA3Q8IXA5 215 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 BMPERQ8N8U9 685 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 AGBL5Q8NDL9 886 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 OR5AR1Q8NGP9 310 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 PPM1MQ96MI6 270 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 DPYSL5Q9BPU6 564 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 HGH1Q9BTY7 390 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 XKR8Q9H6D3 395 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 KIR3DX1Q9H7L2 352 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 APMAPQ9HDC9 416 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 CDC23Q9UJX2 597 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 ADAMTS20P59510 1910 aa18.24■□□□□ 0.51
GMDS-208ENST00000530927 OR6C74A6NCV1 312 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 PRMT5O14744 637 aaPredicted RBP18.23■□□□□ 0.51
GMDS-208ENST00000530927 ACADLP28330 430 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 FMO4P31512 558 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 TTPAP49638 278 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 SH3BP2P78314 561 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 KRT33BQ14525 404 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 SYTL3Q4VX76 610 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 AARS2Q5JTZ9 985 aaKnown RBP18.23■□□□□ 0.51
GMDS-208ENST00000530927 DNTTIP2Q5QJE6 756 aaKnown RBP18.23■□□□□ 0.51
GMDS-208ENST00000530927 FBXO38Q6PIJ6 1188 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 CENPUQ71F23 418 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 DENND6AQ8IWF6 608 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 OR4E2Q8NGC2 313 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 LPGAT1Q92604 370 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 TFGQ92734 400 aaPredicted RBP18.23■□□□□ 0.51
GMDS-208ENST00000530927 TTC1Q99614 292 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 WDR83Q9BRX9 315 aaKnown RBP18.23■□□□□ 0.51
GMDS-208ENST00000530927 EPB41L1Q9H4G0 881 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 WDR70Q9NW82 654 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 GALPQ9UBC7 116 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 CIDEBQ9UHD4 219 aa18.23■□□□□ 0.51
GMDS-208ENST00000530927 TSR3Q9UJK0 312 aaKnown RBP18.23■□□□□ 0.51
GMDS-208ENST00000530927 PLAGL1Q9UM63 463 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms