RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 LONP2Q86WA8 852 aa5.66□□□□□ -1.5
CASP4-208ENST00000530309 DCP1BQ8IZD4 617 aaKnown RBP5.66□□□□□ -1.5
CASP4-208ENST00000530309 ZNF653Q96CK0 615 aa5.66□□□□□ -1.5
CASP4-208ENST00000530309 RMDN1Q96DB5 314 aa5.66□□□□□ -1.5
CASP4-208ENST00000530309 CFAP57Q96MR6 1250 aa5.66□□□□□ -1.5
CASP4-208ENST00000530309 FNDC11Q9BVV2 318 aa5.66□□□□□ -1.5
CASP4-208ENST00000530309 WNT5BQ9H1J7 359 aa5.66□□□□□ -1.5
CASP4-208ENST00000530309 DPAGT1Q9H3H5 408 aa5.66□□□□□ -1.5
CASP4-208ENST00000530309 OPA3Q9H6K4 179 aa5.66□□□□□ -1.5
CASP4-208ENST00000530309 NOL11Q9H8H0 719 aaKnown RBP5.66□□□□□ -1.5
CASP4-208ENST00000530309 ABCF3Q9NUQ8 709 aa5.66□□□□□ -1.5
CASP4-208ENST00000530309 GRIP1Q9Y3R0 1128 aa5.66□□□□□ -1.5
CASP4-208ENST00000530309 CCL27Q9Y4X3 112 aa5.66□□□□□ -1.5
CASP4-208ENST00000530309 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.66□□□□□ -1.5
CASP4-208ENST00000530309 MED19A0JLT2 244 aaPredicted RBP5.65□□□□□ -1.5
CASP4-208ENST00000530309 URADA6NGE7 173 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 RAD23AP54725 363 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 POU3F1Q03052 451 aaPredicted RBP5.65□□□□□ -1.5
CASP4-208ENST00000530309 PNRC1Q12796 327 aaPredicted RBP5.65□□□□□ -1.5
CASP4-208ENST00000530309 HSPB3Q12988 150 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 PRKAA1Q13131 559 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 RNASEH2BQ5TBB1 312 aaKnown RBP5.65□□□□□ -1.5
CASP4-208ENST00000530309 RBPMS2Q6ZRY4 209 aaKnown RBP5.65□□□□□ -1.5
CASP4-208ENST00000530309 FOXL2NBQ6ZUU3 175 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 L3MBTL4Q8NA19 623 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 XXYLT1Q8NBI6 393 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 OR6J1Q8NGC5 347 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 CD101Q93033 1021 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 VPS33AQ96AX1 596 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 LINC00615Q96LM1 132 aaPredicted RBP5.65□□□□□ -1.5
CASP4-208ENST00000530309 PKP4Q99569 1192 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 ABHD6Q9BV23 337 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 ERVMER34-1Q9H9K5 563 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 PRMT7Q9NVM4 692 aaPredicted RBP5.65□□□□□ -1.5
CASP4-208ENST00000530309 ZHX1Q9UKY1 873 aaPredicted RBP5.65□□□□□ -1.5
CASP4-208ENST00000530309 NME7Q9Y5B8 376 aa5.65□□□□□ -1.5
CASP4-208ENST00000530309 SPRY1O43609 319 aaPredicted RBP5.64□□□□□ -1.51
CASP4-208ENST00000530309 BAG4O95429 457 aaKnown RBP5.64□□□□□ -1.51
CASP4-208ENST00000530309 IGHV4-39P01824 125 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 H1F0P07305 194 aaKnown RBP5.64□□□□□ -1.51
CASP4-208ENST00000530309 OR2T7P0C7T2 308 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 DANCRP0C864 163 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 FMO5P49326 533 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 HOXA1P49639 335 aaPredicted RBP5.64□□□□□ -1.51
CASP4-208ENST00000530309 ZNF75DP51815 510 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 RALGDSQ12967 914 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 FAM133BQ5BKY9 247 aaKnown RBP5.64□□□□□ -1.51
CASP4-208ENST00000530309 SIRPB2Q5JXA9 342 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 ARMC4Q5T2S8 1044 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 GRTP1Q5TC63 336 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 CST9LP1Q5W188 147 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 WBP2NLQ6ICG8 309 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 FAM198BQ6UWH4 519 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 ZNF852Q6ZMS4 543 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 RFLNBQ8N5W9 214 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 METTL27Q8N6F8 245 aaPredicted RBP5.64□□□□□ -1.51
CASP4-208ENST00000530309 MAB21L3Q8N8X9 362 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 SECISBP2LQ93073 1101 aaKnown RBP5.64□□□□□ -1.51
CASP4-208ENST00000530309 LMF2Q9BU23 707 aaKnown RBP5.64□□□□□ -1.51
CASP4-208ENST00000530309 ANKRD2Q9GZV1 360 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 CNOT10Q9H9A5 744 aaKnown RBP5.64□□□□□ -1.51
CASP4-208ENST00000530309 TBC1D17Q9HA65 648 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 OSER1Q9NX31 292 aa5.64□□□□□ -1.51
CASP4-208ENST00000530309 SPIN1Q9Y657 262 aaPredicted RBP5.64□□□□□ -1.51
CASP4-208ENST00000530309 IGLV5-45A0A087WSX0 123 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 A0A1W2PPI3 338 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 FEZF1A0PJY2 475 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 C16orf97H3BN30 126 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 CAPN9O14815 690 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 CTSVO60911 334 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 CETPP11597 493 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 SLC9A3P48764 834 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 RAB28P51157 221 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 GAS1P54826 345 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 ERVFC1-1P60608 527 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 KIR2DS3Q14952 304 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 PSMD6Q15008 389 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 CHST3Q7LGC8 479 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 TICAM2Q86XR7 235 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 GPALPP1Q8IXQ4 340 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 OR13A1Q8NGR1 328 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 ATL1Q8WXF7 558 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 SLAMF9Q96A28 289 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 HDAC11Q96DB2 347 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 DPP3Q9NY33 737 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 STK26Q9P289 416 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 SLC24A2Q9UI40 661 aa5.63□□□□□ -1.51
CASP4-208ENST00000530309 TAF1P21675 1872 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 A0A1W2PPM1 405 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 PRR32B1ATL7 298 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 BUB3O43684 328 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 ZNF500O60304 480 aaPredicted RBP5.62□□□□□ -1.51
CASP4-208ENST00000530309 OR10H2O60403 315 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 FYNP06241 537 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 CCDC175P0C221 793 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 CKMT2P17540 419 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 CBLP22681 906 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 PCGF2P35227 344 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 MTHFRP42898 656 aa5.62□□□□□ -1.51
CASP4-208ENST00000530309 MBTD1Q05BQ5 628 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms