RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	APOC1	P02654	83 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	FGB	P02675	491 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	CYP11A1	P05108	521 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	TGFB3	P10600	412 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	RPA4	Q13156	261 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	GTF2H2	Q13888	395 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	MOG	Q16653	247 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	C9orf131	Q5VYM1	1079 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	GTF2H2C	Q6P1K8	395 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	RBFA	Q8N0V3	343 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	CADM2	Q8N3J6	435 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	C11orf65	Q8NCR3	313 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	ARMC5	Q96C12	935 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	CDK15	Q96Q40	435 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	COPS8	Q99627	209 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	HSD17B14	Q9BPX1	270 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	WAC	Q9BTA9	647 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	HERC2P3	Q9BVR0	1158 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	CST11	Q9H112	138 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	OSER1	Q9NX31	292 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	TLL2	Q9Y6L7	1015 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	LOC100509620	A0A075B734	347 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	CYP3A7-CYP3A51P	A0A087WV96	503 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	CXorf49	A8MYA2	514 aa	Predicted RBP	7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	ISM1	B1AKI9	464 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	GNB5	O14775	395 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	ADAMDEC1	O15204	470 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	PRKACG	P22612	351 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	RPS3	P23396	243 aa	Known RBP eCLIP	7.53	□□□□□ -1.2	7e-7	■■■□□ 16.1
CTNND1-223	ENST00000529986	CYP3A7	P24462	503 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	SSR2	P43308	183 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	CBX5	P45973	191 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	ZNF132	P52740	706 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	TSPAN5	P62079	268 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	DSC2	Q02487	901 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	MFSD10	Q14728	455 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	LAPTM4A	Q15012	233 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	PON2	Q15165	354 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	TST	Q16762	297 aa	Known RBP	7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	SLC25A52	Q3SY17	297 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	ATP13A5	Q4VNC0	1218 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	RBM48	Q5RL73	367 aa	Known RBP	7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	CELF3	Q5SZQ8	465 aa	Known RBP	7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	C1orf189	Q5VU69	101 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	CCDC28A	Q8IWP9	274 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	OR2L5	Q8NG80	312 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	ZFAND2B	Q8WV99	257 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	ZNF717	Q9BY31	904 aa	Predicted RBP	7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	ATP13A3	Q9H7F0	1226 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	CKLF	Q9UBR5	152 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	TNFSF13B	Q9Y275	285 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	TMED5	Q9Y3A6	229 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	GPSM3	Q9Y4H4	160 aa		7.53	□□□□□ -1.2
CTNND1-223	ENST00000529986	ILVBL	A1L0T0	632 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986		M0R036	132 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	WRB	O00258	174 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	AP2A1	O95782	977 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	RPLP2	P05387	115 aa	Known RBP	7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	CYP3A5	P20815	502 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	LHCGR	P22888	699 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	ITPKB	P27987	946 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	CLCN2	P51788	898 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	SEMA3A	Q14563	771 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	ACAP2	Q15057	778 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	PLEKHG6	Q3KR16	790 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	RAB12	Q6IQ22	244 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	RTL4	Q6ZR62	310 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	SLITRK4	Q8IW52	837 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	TMEM86A	Q8N2M4	240 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	CEP76	Q8TAP6	659 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	ZNF285	Q96NJ3	590 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	MYOC	Q99972	504 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	CDADC1	Q9BWV3	514 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	IDI2	Q9BXS1	227 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	TIGAR	Q9NQ88	270 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	PLK2	Q9NYY3	685 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	DNAJB4	Q9UDY4	337 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	DPP7	Q9UHL4	492 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	FBP2	O00757	339 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	DIRAS1	O95057	198 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	CLDN9	O95484	217 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	CHRNB2	P17787	502 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	CSTF2	P33240	577 aa	Known RBP eCLIP	7.52	□□□□□ -1.21	1e-7	■■□□□ 12.3
CTNND1-223	ENST00000529986	FNTB	P49356	437 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	TAS2R39	P59534	338 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	SNRPD1	P62314	119 aa	Known RBP	7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	PIGF	Q07326	219 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	HSPB3	Q12988	150 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	TARDBP	Q13148	414 aa	Known RBP eCLIP	7.52	□□□□□ -1.21	1e-8	■■■■□ 21.9
CTNND1-223	ENST00000529986	TBRG1	Q3YBR2	411 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	DCAF12L1	Q5VU92	463 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	KIAA1161	Q6NSJ0	714 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	BEND5	Q7L4P6	421 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	ITIH5	Q86UX2	942 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	JAZF1	Q86VZ6	243 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	FOXRED2	Q8IWF2	684 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	ELMOD2	Q8IZ81	293 aa		7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	SIDT2	Q8NBJ9	832 aa	Known RBP	7.52	□□□□□ -1.21
CTNND1-223	ENST00000529986	ADAMTS15	Q8TE58	950 aa		7.52	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms