RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 PNLIPP16233 465 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 EIF2S3P41091 472 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 ELK3P41970 407 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 SLC1A2P43004 574 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 BDKRB1P46663 353 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 LSSP48449 732 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 MAPK10P53779 464 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 SH3BP2P78314 561 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 DHX34Q14147 1143 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 ITIH4Q14624 930 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 KCNAB1Q14722 419 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 ZNF470Q6ECI4 717 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 KIAA0930Q6ICG6 404 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 CNSTQ6PJW8 725 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 CAPN12Q6ZSI9 719 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 RAB11FIP2Q7L804 512 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 TRIM73Q86UV7 250 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 PIM3Q86V86 326 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 C2orf73Q8N5S3 287 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 NOA1Q8NC60 698 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 MCUQ8NE86 351 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 OR10G6Q8NH81 332 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 KLHL25Q9H0H3 589 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 POLR1BQ9H9Y6 1135 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 MRM3Q9HC36 420 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 EVA1BQ9NVM1 165 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 ICKQ9UPZ9 632 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 MED16Q9Y2X0 877 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 RPS6KL1Q9Y6S9 549 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 UNC13CQ8NB66 2214 aa11.13□□□□□ -0.63
CCDC90B-211ENST00000529073 TPRP12270 2363 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 APC2O95996 2303 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 TEX51A0A1B0GUA7 166 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 EFCAB8A8MWE9 144 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 CFAP99D6REC4 459 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 BTN3A3O00478 584 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 URI1O94763 535 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 UBXN7O94888 489 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 MLNP12872 115 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 PVRP15151 417 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 WT1P19544 449 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 GABRB3P28472 473 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 PEBP1P30086 187 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 CCKBRP32239 447 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 NSG1P42857 185 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 SEPHS1P49903 392 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 LIMK2P53671 638 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 CDK16Q00536 496 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 TIAL1Q01085 375 aaKnown RBP eCLIP11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 CRYMQ14894 314 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 TYSND1Q2T9J0 566 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 ZDHHC24Q6UX98 284 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 WASH2PQ6VEQ5 465 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 TMEM135Q86UB9 458 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 FBXO39Q8N4B4 442 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 OR52E1Q8NGJ3 308 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 HNRNPLLQ8WVV9 542 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 USP7Q93009 1102 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 STAMBPL1Q96FJ0 436 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 LIN37Q96GY3 246 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 AHCYL2Q96HN2 611 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 IL17FQ96PD4 163 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 FERD3LQ96RJ6 166 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 NDNQ99608 321 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 C19orf43Q9BQ61 176 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 NRSN2Q9GZP1 204 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 WASH6PQ9NQA3 447 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 IARS2Q9NSE4 1012 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 C20orf96Q9NUD7 363 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 SLC24A2Q9UI40 661 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 ITPR1Q14643 2758 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 EPG5Q9HCE0 2579 aa11.12□□□□□ -0.63
CCDC90B-211ENST00000529073 MN1Q10571 1320 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 IGHV5-51A0A0C4DH38 117 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 FAM237BA0A1B0GVD1 139 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 OR6C74A6NCV1 312 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 SDR42E2A6NKP2 422 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 EFCAB7A8K855 629 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 CDRT15L2A8MXV6 281 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 BTN3A1O00481 513 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 PLD2O14939 933 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 CAPN5O15484 640 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 DUX1O43812 170 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 HAUS5O94927 633 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 S1PR4O95977 384 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 CTSBP07858 339 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 RALBP11234 206 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 VCLP18206 1134 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 POLR2CP19387 275 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 ACADLP28330 430 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 GMPRP36959 345 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 HALP42357 657 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 PAFAH1B1P43034 410 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 GPR3P46089 330 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 CAPZBP47756 277 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 KPNA2P52292 529 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 ABRQ12979 859 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 CUL1Q13616 776 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 PLCL1Q15111 1095 aa11.11□□□□□ -0.63
CCDC90B-211ENST00000529073 TBC1D25Q3MII6 688 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms