RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SLC16A5O15375 505 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 KCNK5O95279 499 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 SNRNP70P08621 437 aaKnown RBP5.68□□□□□ -1.5
PCF11-202ENST00000528336 PCP11498 1178 aaKnown RBP5.68□□□□□ -1.5
PCF11-202ENST00000528336 KRT13P13646 458 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 HLA-DPA1P20036 260 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 CORO1AP31146 461 aaKnown RBP5.68□□□□□ -1.5
PCF11-202ENST00000528336 HOXC9P31274 260 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 PSMB10P40306 273 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 TRPC1P48995 793 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 COX10Q12887 443 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 LRMPQ12912 555 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 ZBTB17Q13105 803 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 COG2Q14746 738 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 KLHL22Q53GT1 634 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 TCP11X2Q5H9J9 407 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 DCST1Q5T197 706 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 KDELC1Q6UW63 502 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 SEPT14Q6ZU15 432 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 DENND5BQ6ZUT9 1274 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 RNF168Q8IYW5 571 aaPredicted RBP5.68□□□□□ -1.5
PCF11-202ENST00000528336 WDTC1Q8N5D0 677 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.68□□□□□ -1.5
PCF11-202ENST00000528336 SLC20A1Q8WUM9 679 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 SGCDQ92629 289 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 CABS1Q96KC9 395 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 SH2D4AQ9H788 454 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 PDE7BQ9NP56 450 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 HCFC1R1Q9NWW0 138 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 HOXC10Q9NYD6 342 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 COPG2Q9UBF2 871 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 UBA2Q9UBT2 640 aaPredicted RBP5.68□□□□□ -1.5
PCF11-202ENST00000528336 MOSPD1Q9UJG1 213 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 PADI1Q9ULC6 663 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 AMDHD2Q9Y303 409 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 LYVE1Q9Y5Y7 322 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 ARHGAP23Q9P227 1491 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 SLIT1O75093 1534 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 UBR1Q8IWV7 1749 aa5.68□□□□□ -1.5
PCF11-202ENST00000528336 TMEM131LA2VDJ0 1609 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 SPATA31E1Q6ZUB1 1445 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 IGHV4OR15-8A0A075B7B6 117 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 TULP2O00295 520 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 ATP2A1O14983 1001 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 VILLO15195 856 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 HCRTR2O43614 444 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 SYNCRIPO60506 623 aaKnown RBP5.67□□□□□ -1.5
PCF11-202ENST00000528336 SEC22BO75396 215 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 DDNO94850 711 aaPredicted RBP5.67□□□□□ -1.5
PCF11-202ENST00000528336 SLU7O95391 586 aaKnown RBP5.67□□□□□ -1.5
PCF11-202ENST00000528336 S1PR1P21453 382 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 UBA1P22314 1058 aaKnown RBP5.67□□□□□ -1.5
PCF11-202ENST00000528336 EEF1DP29692 281 aaKnown RBP5.67□□□□□ -1.5
PCF11-202ENST00000528336 GNL1P36915 607 aaPredicted RBP5.67□□□□□ -1.5
PCF11-202ENST00000528336 PRCPP42785 496 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 GAS1P54826 345 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 TAS2R38P59533 333 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 ERVFC1-1P60608 527 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 RPL36AP83881 106 aaKnown RBP5.67□□□□□ -1.5
PCF11-202ENST00000528336 PNLIPRP3Q17RR3 467 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 FRG2Q64ET8 278 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 UNQ6126/PRO20091Q6UXV3 157 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 GLDNQ6ZMI3 551 aaPredicted RBP5.67□□□□□ -1.5
PCF11-202ENST00000528336 BHLHA9Q7RTU4 235 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 PIWIL3Q7Z3Z3 882 aaKnown RBP5.67□□□□□ -1.5
PCF11-202ENST00000528336 PPP1R42Q7Z4L9 355 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 GLRX5Q86SX6 157 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 TTC39CQ8N584 583 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 ACVR1CQ8NER5 493 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 Q8NFD4 153 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 IPMKQ8NFU5 416 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 OR8K5Q8NH50 307 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 FBXO30Q8TB52 745 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 ZFAND2BQ8WV99 257 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 SORCS1Q8WY21 1168 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 ABTB1Q969K4 478 aaPredicted RBP5.67□□□□□ -1.5
PCF11-202ENST00000528336 EXOC4Q96A65 974 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 ATP6V0BQ99437 205 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 FSD1Q9BTV5 496 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 ACAT2Q9BWD1 397 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 CSTL1Q9H114 145 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 PIGMQ9H3S5 423 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 UBTD1Q9HAC8 227 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 LTB4R2Q9NPC1 389 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 CWC15Q9P013 229 aaKnown RBP5.67□□□□□ -1.5
PCF11-202ENST00000528336 ZNF215Q9UL58 517 aaPredicted RBP5.67□□□□□ -1.5
PCF11-202ENST00000528336 ACSL5Q9ULC5 683 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 KLHL20Q9Y2M5 609 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 CCL27Q9Y4X3 112 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 PCDHAC2Q9Y5I4 1007 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 CLIC4Q9Y696 253 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 CFAP65Q6ZU64 1925 aaKnown RBP5.67□□□□□ -1.5
PCF11-202ENST00000528336 NEURL4Q96JN8 1562 aa5.67□□□□□ -1.5
PCF11-202ENST00000528336 ZFYVE9O95405 1425 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 SCAF11Q99590 1463 aaKnown RBP5.66□□□□□ -1.5
PCF11-202ENST00000528336 A0A1B0GUV1 79 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 FRMD3A2A2Y4 597 aa5.66□□□□□ -1.5
PCF11-202ENST00000528336 KRTAP29-1A8MX34 341 aaPredicted RBP5.66□□□□□ -1.5
PCF11-202ENST00000528336 PRAC2D3DTV9 90 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms