RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	YBX2	Q9Y2T7	364 aa	Known RBP	10.04	□□□□□ -0.8
PGAP2-231	ENST00000528216	TIMM22	Q9Y584	194 aa		10.04	□□□□□ -0.8
PGAP2-231	ENST00000528216	MTCL1	Q9Y4B5	1905 aa	Known RBP	10.04	□□□□□ -0.8
PGAP2-231	ENST00000528216		A0A1W2PRU2	124 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	DHRS12	A0PJE2	317 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	SERTM1	A2A2V5	107 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	NPIPB8	E9PQR5	432 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	TXNDC9	O14530	226 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	OR7A17	O14581	309 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	LSM1	O15116	133 aa	Known RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	NUAK1	O60285	661 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	RNASEH1	O60930	286 aa	Known RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	TRIM16	O95361	564 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	CA3	P07451	260 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	PABPC1	P11940	636 aa	Known RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	EPB42	P16452	691 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	NNMT	P40261	264 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	CCNH	P51946	323 aa	Predicted RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	HNRNPF	P52597	415 aa	Known RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	DIO3	P55073	304 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	AP1S2	P56377	157 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	ECT2L	Q008S8	904 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	KCNC3	Q14003	757 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	GBX1	Q14549	363 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	TLR1	Q15399	786 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	HABP4	Q5JVS0	413 aa	Known RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	PPP4R4	Q6NUP7	873 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	LETMD1	Q6P1Q0	360 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	IL27RA	Q6UWB1	636 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216		Q6ZSR9	355 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	TBC1D21	Q8IYX1	336 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	HS6ST3	Q8IZP7	471 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	PAPD5	Q8NDF8	572 aa	Known RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	OR4F6	Q8NGB9	312 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	TMEM125	Q96AQ2	219 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	EGFL8	Q99944	293 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	CORO1B	Q9BR76	489 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	ZNF696	Q9H7X3	374 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	SLC28A3	Q9HAS3	691 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	MAGEL2	Q9UJ55	1249 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	PACSIN3	Q9UKS6	424 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	FNDC3A	Q9Y2H6	1198 aa	Known RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	AP4B1	Q9Y6B7	739 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	NPIPB15	A6NHN6	443 aa	Predicted RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	XYLB	O75191	536 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	STK16	O75716	305 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	ASL	P04424	464 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	ZNF26	P17031	533 aa	Predicted RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	FAS	P25445	335 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	PRDX3	P30048	256 aa	Known RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	HLA-F	P30511	346 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	SPINT3	P49223	89 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	CCR3	P51677	355 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	RALGDS	Q12967	914 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	ARHGEF7	Q14155	803 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	NR6A1	Q15406	480 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	CACHD1	Q5VU97	1274 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	LRRC66	Q68CR7	880 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	LAYN	Q6UX15	382 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	GDPD4	Q6W3E5	623 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	OR52B6	Q8NGF0	335 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	OR8J3	Q8NGG0	315 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	SP7	Q8TDD2	431 aa	Predicted RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	WFIKKN2	Q8TEU8	576 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	IRF7	Q92985	503 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	METTL2A	Q96IZ6	378 aa	Known RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	KCTD14	Q9BQ13	255 aa	Predicted RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	C17orf80	Q9BSJ5	609 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	C9orf16	Q9BUW7	83 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	SLC12A9	Q9BXP2	914 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	MRPS26	Q9BYN8	205 aa	Known RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	OSBPL6	Q9BZF3	934 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	PCDHAC1	Q9H158	963 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	ALG2	Q9H553	416 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	SLC32A1	Q9H598	525 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	BRD9	Q9H8M2	597 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	DKK3	Q9UBP4	350 aa		10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	CNOT6	Q9ULM6	557 aa	Known RBP	10.03	□□□□□ -0.8
PGAP2-231	ENST00000528216	TRIOBP	Q9H2D6	2365 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	IQCF5	A8MTL0	148 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	SOX1	O00570	391 aa	Predicted RBP	10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	ZNF197	O14709	1029 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	TAPBP	O15533	448 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	UGDH	O60701	494 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	ULK1	O75385	1050 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	TULP3	O75386	442 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	GMNN	O75496	209 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	IL6	P05231	212 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	FAM58BP	P0C7Q3	252 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	PABPC4L	P0CB38	370 aa	Known RBP	10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	CHRM1	P11229	460 aa	Predicted RBP	10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	PSMC3	P17980	439 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	HIST1H2AD	P20671	130 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	PRPH2	P23942	346 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	AOAH	P28039	575 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	MAPK1	P28482	360 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	AKT1	P31749	480 aa		10.02	□□□□□ -0.81
PGAP2-231	ENST00000528216	VIPR1	P32241	457 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms