RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ZNF778Q96MU6 729 aa32.22■■■□□ 2.75
SSSCA1-205ENST00000527920 CTRCQ99895 268 aa32.22■■■□□ 2.75
SSSCA1-205ENST00000527920 IL22Q9GZX6 179 aa32.22■■■□□ 2.75
SSSCA1-205ENST00000527920 PCDHGA4Q9Y5G9 962 aa32.22■■■□□ 2.75
SSSCA1-205ENST00000527920 F8W8V4 182 aa32.21■■■□□ 2.75
SSSCA1-205ENST00000527920 LIN7AO14910 233 aaPredicted RBP32.21■■■□□ 2.75
SSSCA1-205ENST00000527920 FTH1P02794 183 aa32.21■■■□□ 2.75
SSSCA1-205ENST00000527920 SEPHS1P49903 392 aa32.21■■■□□ 2.75
SSSCA1-205ENST00000527920 ZSCAN1Q8NBB4 408 aa32.21■■■□□ 2.75
SSSCA1-205ENST00000527920 ACVR1CQ8NER5 493 aa32.21■■■□□ 2.75
SSSCA1-205ENST00000527920 OR4L1Q8NH43 312 aa32.21■■■□□ 2.75
SSSCA1-205ENST00000527920 TRIT1Q9H3H1 467 aaKnown RBP32.21■■■□□ 2.75
SSSCA1-205ENST00000527920 TLCD2A6NGC4 264 aa32.2■■■□□ 2.75
SSSCA1-205ENST00000527920 MAP4P27816 1152 aaKnown RBP32.2■■■□□ 2.75
SSSCA1-205ENST00000527920 PRAMEP78395 509 aa32.2■■■□□ 2.75
SSSCA1-205ENST00000527920 MAP7Q14244 749 aa32.2■■■□□ 2.75
SSSCA1-205ENST00000527920 KRT33BQ14525 404 aa32.2■■■□□ 2.75
SSSCA1-205ENST00000527920 ZNF534Q76KX8 674 aa32.2■■■□□ 2.75
SSSCA1-205ENST00000527920 NLGN4XQ8N0W4 816 aa32.2■■■□□ 2.75
SSSCA1-205ENST00000527920 IL22RA1Q8N6P7 574 aa32.2■■■□□ 2.75
SSSCA1-205ENST00000527920 NLGN4YQ8NFZ3 816 aaPredicted RBP32.2■■■□□ 2.75
SSSCA1-205ENST00000527920 JPH3Q8WXH2 748 aaPredicted RBP32.2■■■□□ 2.75
SSSCA1-205ENST00000527920 MVB12BQ9H7P6 319 aa32.2■■■□□ 2.75
SSSCA1-205ENST00000527920 HRASLS2Q9NWW9 162 aa32.2■■■□□ 2.75
SSSCA1-205ENST00000527920 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 ZSCAN12O43309 604 aa32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 STK17BO94768 372 aa32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 DLGAP3O95886 979 aa32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 TPSB2P20231 275 aa32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 PPARGP37231 505 aaPredicted RBP32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 NPY2RP49146 381 aa32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 PPP1CAP62136 330 aa32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 PLOD1Q02809 727 aaPredicted RBP32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 FOXM1Q08050 763 aa32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 TPSAB1Q15661 275 aa32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 AARS2Q5JTZ9 985 aaKnown RBP32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 REXO1L1PQ8IX06 675 aa32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 OR6P1Q8NGX9 317 aa32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 NAP1L3Q99457 506 aaPredicted RBP32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 BFARQ9NZS9 450 aa32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 PRSS21Q9Y6M0 314 aa32.19■■■□□ 2.74
SSSCA1-205ENST00000527920 OR56A5P0C7T3 313 aa32.18■■■□□ 2.74
SSSCA1-205ENST00000527920 MAGEA6P43360 314 aa32.18■■■□□ 2.74
SSSCA1-205ENST00000527920 TAF1BQ53T94 588 aaPredicted RBP32.18■■■□□ 2.74
SSSCA1-205ENST00000527920 DNTTIP2Q5QJE6 756 aaKnown RBP32.18■■■□□ 2.74
SSSCA1-205ENST00000527920 KIAA1614Q5VZ46 1190 aa32.18■■■□□ 2.74
SSSCA1-205ENST00000527920 ARMC3Q5W041 872 aa32.18■■■□□ 2.74
SSSCA1-205ENST00000527920 CHRAC1Q9NRG0 131 aa32.18■■■□□ 2.74
SSSCA1-205ENST00000527920 ATMQ13315 3056 aa32.18■■■□□ 2.74
SSSCA1-205ENST00000527920 IGHV5-51A0A0C4DH38 117 aa32.17■■■□□ 2.74
SSSCA1-205ENST00000527920 MATN2O00339 956 aa32.17■■■□□ 2.74
SSSCA1-205ENST00000527920 ITGB2P05107 769 aa32.17■■■□□ 2.74
SSSCA1-205ENST00000527920 FGF5P12034 268 aa32.17■■■□□ 2.74
SSSCA1-205ENST00000527920 WT1P19544 449 aaPredicted RBP32.17■■■□□ 2.74
SSSCA1-205ENST00000527920 PDHA2P29803 388 aa32.17■■■□□ 2.74
SSSCA1-205ENST00000527920 SESN2P58004 480 aaPredicted RBP32.17■■■□□ 2.74
SSSCA1-205ENST00000527920 SH3BP2P78314 561 aa32.17■■■□□ 2.74
SSSCA1-205ENST00000527920 FASTKD1Q53R41 847 aaKnown RBP32.17■■■□□ 2.74
SSSCA1-205ENST00000527920 TFGQ92734 400 aaPredicted RBP32.17■■■□□ 2.74
SSSCA1-205ENST00000527920 OR6C1Q96RD1 312 aa32.17■■■□□ 2.74
SSSCA1-205ENST00000527920 TFB2MQ9H5Q4 396 aaKnown RBP32.17■■■□□ 2.74
SSSCA1-205ENST00000527920 TREX1Q9NSU2 369 aa32.17■■■□□ 2.74
SSSCA1-205ENST00000527920 OR6C74A6NCV1 312 aa32.16■■■□□ 2.74
SSSCA1-205ENST00000527920 PREPP48147 710 aa32.16■■■□□ 2.74
SSSCA1-205ENST00000527920 ABHD18Q0P651 414 aa32.16■■■□□ 2.74
SSSCA1-205ENST00000527920 BOP1Q14137 746 aaKnown RBP32.16■■■□□ 2.74
SSSCA1-205ENST00000527920 CYP1B1Q16678 543 aa32.16■■■□□ 2.74
SSSCA1-205ENST00000527920 ARMC6Q6NXE6 501 aa32.16■■■□□ 2.74
SSSCA1-205ENST00000527920 LRRC8BQ6P9F7 803 aa32.16■■■□□ 2.74
SSSCA1-205ENST00000527920 MAP3K3Q99759 626 aa32.16■■■□□ 2.74
SSSCA1-205ENST00000527920 MRM3Q9HC36 420 aaKnown RBP32.16■■■□□ 2.74
SSSCA1-205ENST00000527920 PIKFYVEQ9Y2I7 2098 aa32.15■■■□□ 2.74
SSSCA1-205ENST00000527920 LARP7Q4G0J3 582 aaKnown RBP eCLIP32.15■■■□□ 2.74
SSSCA1-205ENST00000527920 TIPARPQ7Z3E1 657 aaKnown RBP32.15■■■□□ 2.74
SSSCA1-205ENST00000527920 BPHLQ86WA6 291 aaPredicted RBP32.15■■■□□ 2.74
SSSCA1-205ENST00000527920 MPP5Q8N3R9 675 aa32.15■■■□□ 2.74
SSSCA1-205ENST00000527920 ESX1Q8N693 406 aa32.15■■■□□ 2.74
SSSCA1-205ENST00000527920 LCN9Q8WX39 176 aa32.15■■■□□ 2.74
SSSCA1-205ENST00000527920 ELMO1Q92556 727 aa32.15■■■□□ 2.74
SSSCA1-205ENST00000527920 FCRL4Q96PJ5 515 aa32.15■■■□□ 2.74
SSSCA1-205ENST00000527920 FERD3LQ96RJ6 166 aa32.15■■■□□ 2.74
SSSCA1-205ENST00000527920 EFHD1Q9BUP0 239 aa32.15■■■□□ 2.74
SSSCA1-205ENST00000527920 ULBP3Q9BZM4 244 aa32.15■■■□□ 2.74
SSSCA1-205ENST00000527920 KALRNO60229 2985 aa32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 UBA6A0AVT1 1052 aaPredicted RBP32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 SLC5A10A0PJK1 596 aa32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 PGRMC1O00264 195 aaKnown RBP32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 OR1I1O60431 355 aa32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 PRKAA1Q13131 559 aa32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 TTC27Q6P3X3 843 aa32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 SIDT2Q8NBJ9 832 aaKnown RBP32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 OR4E2Q8NGC2 313 aa32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 MAGOHBQ96A72 148 aaKnown RBP32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 KIFC1Q9BW19 673 aa32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 KCNF1Q9H3M0 494 aa32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 SRMSQ9H3Y6 488 aa32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 PDE7BQ9NP56 450 aa32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 CATSPERZQ9NTU4 200 aa32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 ANAPC5Q9UJX4 755 aa32.14■■■□□ 2.74
SSSCA1-205ENST00000527920 POMT2Q9UKY4 750 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms