RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 CDKL3Q8IVW4 592 aaPredicted RBP10.29□□□□□ -0.76
CPSF1-203ENST00000527916 RBM12BQ8IXT5 1001 aaKnown RBP10.29□□□□□ -0.76
CPSF1-203ENST00000527916 KLHDC8BQ8IXV7 354 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 TXLNBQ8N3L3 684 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 SLC25A41Q8N5S1 370 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 IPMKQ8NFU5 416 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 KLHL6Q8WZ60 621 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 SNRNP40Q96DI7 357 aaKnown RBP10.29□□□□□ -0.76
CPSF1-203ENST00000527916 C19orf60Q96EN9 201 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 TTC25Q96NG3 672 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 BAG1Q99933 345 aaPredicted RBP10.29□□□□□ -0.76
CPSF1-203ENST00000527916 FSD1LQ9BXM9 530 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 ZCCHC2Q9C0B9 1178 aaKnown RBP10.29□□□□□ -0.76
CPSF1-203ENST00000527916 BPIFA1Q9NP55 256 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 ARFGAP3Q9NP61 516 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 POT1Q9NUX5 634 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 SMOXQ9NWM0 555 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 GPR83Q9NYM4 423 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 RARRES3Q9UL19 164 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 FARSAQ9Y285 508 aaKnown RBP10.29□□□□□ -0.76
CPSF1-203ENST00000527916 PKP3Q9Y446 797 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 SEC16AO15027 2179 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 SVILO95425 2214 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 NAV3Q8IVL0 2385 aa10.29□□□□□ -0.76
CPSF1-203ENST00000527916 CSMD2Q7Z408 3487 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 CNTRLQ7Z7A1 2325 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 GLYATL1P3A0A0U1RQE8 302 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 GRID2IPA4D2P6 1211 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 KLHL33A6NCF5 533 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 C2orf81A6NN90 581 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 MIF4GDA9UHW6 222 aaKnown RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 MTX2O75431 263 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 STK10O94804 968 aaKnown RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 AGTP01019 485 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 SLC4A1P02730 911 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 PYGMP11217 842 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 BRAFP15056 766 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 NELFEP18615 380 aaKnown RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 SLC19A1P41440 591 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 PTGIRP43119 386 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 ITGA1P56199 1179 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 EIF3EP60228 445 aaKnown RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 RPS18P62269 152 aaKnown RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 KIF5AQ12840 1032 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 MSLNQ13421 630 aaPredicted RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 TUBB3Q13509 450 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 IL10RAQ13651 578 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 GTF2H3Q13889 308 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 TAF1AQ15573 450 aaPredicted RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 PWWP2BQ6NUJ5 590 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 DARS2Q6PI48 645 aaKnown RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 CRTC3Q6UUV7 619 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 TMEM139Q8IV31 216 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 SYCE1Q8N0S2 351 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 RBMXL3Q8N7X1 1067 aaKnown RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 DDHD1Q8NEL9 900 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 FDCSPQ8NFU4 85 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 BLOC1S5Q8TDH9 187 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 ALG3Q92685 438 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 ZNF514Q96K75 400 aaPredicted RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 SPATA13Q96N96 652 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 GORASP1Q9BQQ3 440 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 RAB33BQ9H082 229 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 OSGEPL1Q9H4B0 414 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 ARNT2Q9HBZ2 717 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 SLC40A1Q9NP59 571 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 ASF1BQ9NVP2 202 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 OGFRQ9NZT2 677 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 SCHIP1Q9P0W5 487 aaPredicted RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 ZNF624Q9P2J8 865 aaPredicted RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 FEZ2Q9UHY8 353 aaPredicted RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 AMFRQ9UKV5 643 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 MDC1Q14676 2089 aaKnown RBP10.28□□□□□ -0.76
CPSF1-203ENST00000527916 DCHS2Q6V1P9 2916 aa10.28□□□□□ -0.76
CPSF1-203ENST00000527916 MED13LQ71F56 2210 aa10.27□□□□□ -0.76
CPSF1-203ENST00000527916 HEATR9A2RTY3 570 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 A6NL46 340 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 AGAP14A8MT82 685 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 GAPDHSO14556 408 aaPredicted RBP10.27□□□□□ -0.77
CPSF1-203ENST00000527916 ZNF185O15231 689 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 STX7O15400 261 aaKnown RBP10.27□□□□□ -0.77
CPSF1-203ENST00000527916 KCNN4O15554 427 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 KIF1CO43896 1103 aaKnown RBP10.27□□□□□ -0.77
CPSF1-203ENST00000527916 UGT1A9O60656 530 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 TMEM63AO94886 807 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 CRTAMO95727 393 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 PRF1P14222 555 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 UGT1A6P19224 532 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 UGT1A1P22309 533 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 UGT1A4P22310 534 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 CDC25BP30305 580 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 CAPZBP47756 277 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 RRADP55042 308 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 ACY1Q03154 408 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 ZXDCQ2QGD7 858 aaPredicted RBP10.27□□□□□ -0.77
CPSF1-203ENST00000527916 FAM199XQ6PEV8 388 aaPredicted RBP10.27□□□□□ -0.77
CPSF1-203ENST00000527916 FAM92BQ6ZTR7 304 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 MED25Q71SY5 747 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 PEX26Q7Z412 305 aa10.27□□□□□ -0.77
CPSF1-203ENST00000527916 KIAA1328Q86T90 577 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms