RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 NXPE1Q8N323 547 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 CBARPQ8N350 705 aaPredicted RBP17.26■□□□□ 0.35
USH1C-205ENST00000527020 CPXM2Q8N436 756 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 FAM47BQ8NA70 645 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 UBTD2Q8WUN7 234 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 BIRC7Q96CA5 298 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 PPM1MQ96MI6 270 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 HTATIP2Q9BUP3 242 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 C9orf16Q9BUW7 83 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 ATP13A3Q9H7F0 1226 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 ANAPC2Q9UJX6 822 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 HELZP42694 1942 aaKnown RBP17.26■□□□□ 0.35
USH1C-205ENST00000527020 FKTNO75072 461 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 IGSF6O95976 241 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 UMPSP11172 480 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 CTSOP43234 321 aaPredicted RBP17.26■□□□□ 0.35
USH1C-205ENST00000527020 MAPK8P45983 427 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 TRIM60Q495X7 471 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 PYCR3Q53H96 274 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 LYPLAL1Q5VWZ2 237 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 KRT80Q6KB66 452 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 CRTC1Q6UUV9 634 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 SLC39A5Q6ZMH5 540 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 MBOAT1Q6ZNC8 495 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 ITIH5Q86UX2 942 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 CHCHD4Q8N4Q1 142 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 FIBINQ8TAL6 211 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 LMLNQ96KR4 655 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 EGFL8Q99944 293 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 CAAP1Q9H8G2 361 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 TLR9Q9NR96 1032 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 SPG21Q9NZD8 308 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 LSM7Q9UK45 103 aaKnown RBP17.26■□□□□ 0.35
USH1C-205ENST00000527020 OGDHLQ9ULD0 1010 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 MYRFQ9Y2G1 1151 aa17.26■□□□□ 0.35
USH1C-205ENST00000527020 FFAR3O14843 346 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 GPR42O15529 346 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 RASAL1O95294 804 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 CKMP06732 381 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 CHRM1P11229 460 aaPredicted RBP17.25■□□□□ 0.35
USH1C-205ENST00000527020 ZNF23P17027 643 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 VARSP26640 1264 aaKnown RBP17.25■□□□□ 0.35
USH1C-205ENST00000527020 RPL10P27635 214 aaKnown RBP17.25■□□□□ 0.35
USH1C-205ENST00000527020 STK19P49842 368 aaPredicted RBP17.25■□□□□ 0.35
USH1C-205ENST00000527020 MTPNP58546 118 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 DEFB103AP81534 67 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 SLC7A9P82251 487 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 GPR33Q49SQ1 333 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 MPP7Q5T2T1 576 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 SULT1C3Q6IMI6 304 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 BORAQ6PGQ7 559 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 TMC8Q8IU68 726 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 LYSMD1Q96S90 227 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 CGREF1Q99674 301 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 SH3GL3Q99963 347 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 ADI1Q9BV57 179 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 VCX3AQ9NNX9 186 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 WWOXQ9NZC7 414 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 PTTG2Q9NZH5 202 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 KIAA1522Q9P206 1035 aaPredicted RBP17.25■□□□□ 0.35
USH1C-205ENST00000527020 DMTF1Q9Y222 760 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 PCDHB3Q9Y5E6 796 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 LILRB3O75022 631 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 MT-ND1P03886 318 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 FCGR1AP12314 374 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 SRCP12931 536 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 MSH3P20585 1137 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 MYF6P23409 242 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 ALDH3B2P48448 385 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 PRMT2P55345 433 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 RPL38P63173 70 aaKnown RBP17.25■□□□□ 0.35
USH1C-205ENST00000527020 PTGR1Q14914 329 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 ADRM1Q16186 407 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 AASDHQ4L235 1098 aaPredicted RBP17.25■□□□□ 0.35
USH1C-205ENST00000527020 MPPE1Q53F39 396 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 GRAMD4Q6IC98 578 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 PRR23BQ6ZRT6 265 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 PROSER1Q86XN7 944 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 TBC1D21Q8IYX1 336 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 OR2AP1Q8NGE2 309 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 RMND5BQ96G75 393 aaPredicted RBP17.25■□□□□ 0.35
USH1C-205ENST00000527020 PPP3R2Q96LZ3 170 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 LATS2Q9NRM7 1088 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 OPTCQ9UBM4 332 aa17.25■□□□□ 0.35
USH1C-205ENST00000527020 SLC2A4P14672 509 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 GJA1P17302 382 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 B4GALNT1Q00973 533 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 HMGCS1Q01581 520 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 MERTKQ12866 999 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 PWP1Q13610 501 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 SLC36A3Q495N2 470 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.24■□□□□ 0.35
USH1C-205ENST00000527020 TMTC4Q5T4D3 741 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 RNF165Q6ZSG1 346 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 RFLNAQ6ZTI6 216 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 DTWD1Q8N5C7 304 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 PAF1Q8N7H5 531 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 RDH14Q9HBH5 336 aa17.24■□□□□ 0.35
USH1C-205ENST00000527020 GPBP1L1Q9HC44 474 aaPredicted RBP17.24■□□□□ 0.35
USH1C-205ENST00000527020 SH3BP1Q9Y3L3 701 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms