RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 SPDYE1Q8NFV5 336 aaPredicted RBP20.11■□□□□ 0.81
VPS28-206ENST00000526734 OR6P1Q8NGX9 317 aa20.11■□□□□ 0.81
VPS28-206ENST00000526734 NAT14Q8WUY8 206 aa20.11■□□□□ 0.81
VPS28-206ENST00000526734 NKD1Q969G9 470 aa20.11■□□□□ 0.81
VPS28-206ENST00000526734 PMEPA1Q969W9 287 aa20.11■□□□□ 0.81
VPS28-206ENST00000526734 ANAPC5Q9UJX4 755 aa20.11■□□□□ 0.81
VPS28-206ENST00000526734 TMEM184BQ9Y519 407 aaPredicted RBP20.11■□□□□ 0.81
VPS28-206ENST00000526734 OR51F1A6NGY5 319 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 CES2O00748 559 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 EFSO43281 561 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 KIF5CO60282 957 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 RAD1O60671 282 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 NELFEP18615 380 aaKnown RBP20.1■□□□□ 0.81
VPS28-206ENST00000526734 MAP4P27816 1152 aaKnown RBP20.1■□□□□ 0.81
VPS28-206ENST00000526734 MAGEA6P43360 314 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 DNTTIP2Q5QJE6 756 aaKnown RBP20.1■□□□□ 0.81
VPS28-206ENST00000526734 DUS1LQ6P1R4 473 aaKnown RBP20.1■□□□□ 0.81
VPS28-206ENST00000526734 BPHLQ86WA6 291 aaPredicted RBP20.1■□□□□ 0.81
VPS28-206ENST00000526734 REXO1L1PQ8IX06 675 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 CACNA2D3Q8IZS8 1091 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 NLGN4XQ8N0W4 816 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 LILRA3Q8N6C8 439 aaPredicted RBP20.1■□□□□ 0.81
VPS28-206ENST00000526734 IL22RA1Q8N6P7 574 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 NLGN4YQ8NFZ3 816 aaPredicted RBP20.1■□□□□ 0.81
VPS28-206ENST00000526734 SLC41A2Q96JW4 573 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 EFHD1Q9BUP0 239 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 SPRY4Q9C004 299 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 MRM3Q9HC36 420 aaKnown RBP20.1■□□□□ 0.81
VPS28-206ENST00000526734 HRASLS2Q9NWW9 162 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 SLC2A6Q9UGQ3 507 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 PILRAQ9UKJ1 303 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 IGSF10Q6WRI0 2623 aa20.1■□□□□ 0.81
VPS28-206ENST00000526734 TTPAP49638 278 aa20.09■□□□□ 0.81
VPS28-206ENST00000526734 SEPHS1P49903 392 aa20.09■□□□□ 0.81
VPS28-206ENST00000526734 SESN2P58004 480 aaPredicted RBP20.09■□□□□ 0.81
VPS28-206ENST00000526734 FOXM1Q08050 763 aa20.09■□□□□ 0.81
VPS28-206ENST00000526734 PRKAA1Q13131 559 aa20.09■□□□□ 0.81
VPS28-206ENST00000526734 CYP1B1Q16678 543 aa20.09■□□□□ 0.81
VPS28-206ENST00000526734 LRRC8BQ6P9F7 803 aa20.09■□□□□ 0.81
VPS28-206ENST00000526734 FAM92BQ6ZTR7 304 aa20.09■□□□□ 0.81
VPS28-206ENST00000526734 MAGOHBQ96A72 148 aaKnown RBP20.09■□□□□ 0.81
VPS28-206ENST00000526734 KIAA1143Q96AT1 154 aaPredicted RBP20.09■□□□□ 0.81
VPS28-206ENST00000526734 ZNF778Q96MU6 729 aa20.09■□□□□ 0.81
VPS28-206ENST00000526734 BBC3Q96PG8 261 aaPredicted RBP20.09■□□□□ 0.81
VPS28-206ENST00000526734 FCRL4Q96PJ5 515 aa20.09■□□□□ 0.81
VPS28-206ENST00000526734 CATSPERZQ9NTU4 200 aa20.09■□□□□ 0.81
VPS28-206ENST00000526734 BPTFQ12830 3046 aa20.09■□□□□ 0.81
VPS28-206ENST00000526734 NBEAQ8NFP9 2946 aa20.09■□□□□ 0.81
VPS28-206ENST00000526734 GOLGA6L10A0A0M3HER8 536 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 KIF1CO43896 1103 aaKnown RBP20.08■□□□□ 0.81
VPS28-206ENST00000526734 STK17BO94768 372 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 FGF5P12034 268 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 ARL4DP49703 201 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 ACY1Q03154 408 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 ABHD18Q0P651 414 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 BOP1Q14137 746 aaKnown RBP20.08■□□□□ 0.81
VPS28-206ENST00000526734 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.08■□□□□ 0.81
VPS28-206ENST00000526734 SYTL3Q4VX76 610 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 TAF1BQ53T94 588 aaPredicted RBP20.08■□□□□ 0.81
VPS28-206ENST00000526734 ZNF534Q76KX8 674 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 VASH2Q86V25 355 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 SLC35F6Q8N357 371 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 ESX1Q8N693 406 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 SIDT2Q8NBJ9 832 aaKnown RBP20.08■□□□□ 0.81
VPS28-206ENST00000526734 ACTRT1Q8TDG2 376 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 LCN9Q8WX39 176 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 SLC39A7Q92504 469 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 ELMO1Q92556 727 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 TFGQ92734 400 aaPredicted RBP20.08■□□□□ 0.81
VPS28-206ENST00000526734 FERD3LQ96RJ6 166 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 CTRCQ99895 268 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 TFB2MQ9H5Q4 396 aaKnown RBP20.08■□□□□ 0.81
VPS28-206ENST00000526734 APMAPQ9HDC9 416 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 PDE7BQ9NP56 450 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 CHRAC1Q9NRG0 131 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 TREX1Q9NSU2 369 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 PCDHGA4Q9Y5G9 962 aa20.08■□□□□ 0.81
VPS28-206ENST00000526734 UBA6A0AVT1 1052 aaPredicted RBP20.07■□□□□ 0.8
VPS28-206ENST00000526734 OR6C74A6NCV1 312 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 KDM1AO60341 852 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 DLGAP3O95886 979 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 KRT14P02533 472 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 ITGB2P05107 769 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 KCNJ11Q14654 390 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 LRRC6Q86X45 466 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 PPP1R3BQ86XI6 285 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 GRK7Q8WTQ7 553 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 JPH3Q8WXH2 748 aaPredicted RBP20.07■□□□□ 0.8
VPS28-206ENST00000526734 TTC9Q92623 222 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 OR6C1Q96RD1 312 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 OSBPL9Q96SU4 736 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 KIFC1Q9BW19 673 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 SRMSQ9H3Y6 488 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 POLG2Q9UHN1 485 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 PRSS21Q9Y6M0 314 aa20.07■□□□□ 0.8
VPS28-206ENST00000526734 SLC5A10A0PJK1 596 aa20.06■□□□□ 0.8
VPS28-206ENST00000526734 PFDN6O15212 129 aa20.06■□□□□ 0.8
VPS28-206ENST00000526734 ZBTB11O95625 1053 aaPredicted RBP20.06■□□□□ 0.8
VPS28-206ENST00000526734 MLNP12872 115 aa20.06■□□□□ 0.8
VPS28-206ENST00000526734 PDHA2P29803 388 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms