RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 CCL16O15467 120 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 PAPSS1O43252 624 aaPredicted RBP4.56□□□□□ -1.68
USP48-211ENST00000526044 RFPL2O75678 378 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 CYP1A2P05177 515 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 CCDC175P0C221 793 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 RALAP11233 206 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 KRT3P12035 628 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 HMGA1P17096 107 aaKnown RBP4.56□□□□□ -1.68
USP48-211ENST00000526044 HOXB8P17481 243 aaPredicted RBP4.56□□□□□ -1.68
USP48-211ENST00000526044 ATF6P18850 670 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 GALNSP34059 522 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 GSTM5P46439 218 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 PPP3CCP48454 512 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 NAP1L1P55209 391 aaKnown RBP4.56□□□□□ -1.68
USP48-211ENST00000526044 YWHAGP61981 247 aaKnown RBP eCLIP4.56□□□□□ -1.68
USP48-211ENST00000526044 YWHAZP63104 245 aaKnown RBP4.56□□□□□ -1.68
USP48-211ENST00000526044 SSBP2P81877 361 aaPredicted RBP4.56□□□□□ -1.68
USP48-211ENST00000526044 ADIGQ0VDE8 80 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 HYAL1Q12794 435 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 KIF5AQ12840 1032 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 TAF10Q12962 218 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 PTP4A2Q12974 167 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 SEMA3BQ13214 749 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 KCNC3Q14003 757 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 PTPN20Q4JDL3 420 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 AWAT1Q58HT5 328 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 CYP4A22Q5TCH4 519 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 BSPRYQ5W0U4 402 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 FAM90A2PQ658T7 463 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 DCUN1D2Q6PH85 259 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 FAM183BPQ6ZVS7 135 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 MON1BQ7L1V2 547 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 ARCQ7LC44 396 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 RASGRP3Q8IV61 690 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 SYTL1Q8IYJ3 562 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 SCML4Q8N228 414 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 ARHGAP18Q8N392 663 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 DEFB123Q8N688 67 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 OLIG1Q8TAK6 271 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 RNF139Q8WU17 664 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 SNRNP27Q8WVK2 155 aaKnown RBP4.56□□□□□ -1.68
USP48-211ENST00000526044 IRGQQ8WZA9 623 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 NDRG1Q92597 394 aaKnown RBP4.56□□□□□ -1.68
USP48-211ENST00000526044 GOLGA1Q92805 767 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 ZNF653Q96CK0 615 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 MCRS1Q96EZ8 462 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 SLITRK1Q96PX8 696 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 CDX2Q99626 313 aaPredicted RBP4.56□□□□□ -1.68
USP48-211ENST00000526044 FAM118BQ9BPY3 351 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 DESI2Q9BSY9 194 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 TTLL2Q9BWV7 592 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 ULBP1Q9BZM6 244 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 THAP2Q9H0W7 228 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 ARFGAP3Q9NP61 516 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 TLR8Q9NR97 1041 aaKnown RBP4.56□□□□□ -1.68
USP48-211ENST00000526044 ABCC13Q9NSE7 274 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 ZDHHC7Q9NXF8 308 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 SEMA5BQ9P283 1151 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 UXTQ9UBK9 157 aaPredicted RBP4.56□□□□□ -1.68
USP48-211ENST00000526044 NENFQ9UMX5 172 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 SCML2Q9UQR0 700 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 PPP2R2CQ9Y2T4 447 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 YIPF1Q9Y548 306 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 ATG2AQ2TAZ0 1938 aa4.56□□□□□ -1.68
USP48-211ENST00000526044 COL4A4P53420 1690 aaPredicted RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 A0A1W2PRQ8 180 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 FAM92AA1XBS5 289 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 WDR91A4D1P6 747 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 ZNF840PA6NDX5 716 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 YJEFN3A6XGL0 299 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 BTNL10A8MVZ5 291 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 E7ENQ6 273 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 ZNF197O14709 1029 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 LINC01565O15544 149 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 KRT86O43790 486 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 HSF2BPO75031 334 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 GRAP2O75791 330 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 FGF19O95750 216 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 MBPP02686 304 aaPredicted RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 FYNP06241 537 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 RARGP13631 454 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 PDGFRAP16234 1089 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 DESP17661 470 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 GABRR2P28476 465 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 DUSP1P28562 367 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 HOXA9P31269 272 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 RFC1P35251 1148 aaPredicted RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 ARHGAP25P42331 645 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 GSCP56915 257 aaPredicted RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 DAOAP59103 153 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 SLC14A1Q13336 389 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 MAMLD1Q13495 774 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 MESDQ14696 234 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 DAZAP2Q15038 168 aaPredicted RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 TAF5Q15542 800 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 ELF2Q15723 593 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 P3H1Q32P28 736 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 RARS2Q5T160 578 aaKnown RBP4.55□□□□□ -1.68
USP48-211ENST00000526044 HECTD3Q5T447 861 aa4.55□□□□□ -1.68
USP48-211ENST00000526044 SNX30Q5VWJ9 437 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms