RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 UBR2Q8IWV8 1755 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 ARID1AO14497 2285 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 RGPD3A6NKT7 1758 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 BCORQ6W2J9 1755 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 RGPD4Q7Z3J3 1758 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 A0A1B0GTL3 188 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 SLC35F4A4IF30 521 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 TMEM88BA6NKF7 163 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 ACOT8O14734 319 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 SCAMP1O15126 338 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 RPP40O75818 363 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 CELF2O95319 508 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 ITGB1P05556 798 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 GPIP06744 558 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 ZNF7P17097 686 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 CYP2C18P33260 490 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 SHMT2P34897 504 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 MASP1P48740 699 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 RPS7P62081 194 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 CDC42EP1Q00587 391 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 PLD1Q13393 1074 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 LRP8Q14114 963 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 SELPLGQ14242 412 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 KIAA0930Q6ICG6 404 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 SULT1C3Q6IMI6 304 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 DENND5AQ6IQ26 1287 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 ZNF549Q6P9A3 640 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 SYVN1Q86TM6 617 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 CHERPQ8IWX8 916 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 SLC34A3Q8N130 599 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 TTC9BQ8N6N2 239 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 TTC29Q8NA56 475 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 OR4F6Q8NGB9 312 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 VANGL1Q8TAA9 524 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 NDNFQ8TB73 568 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 KAT2AQ92830 837 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 C12orf42Q96LP6 360 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 NSMCE3Q96MG7 304 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 CCSER2Q9H7U1 834 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 GPBP1L1Q9HC44 474 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 RPRD1BQ9NQG5 326 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 AGO1Q9UL18 857 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 RAI2Q9Y5P3 530 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 CORINQ9Y5Q5 1042 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 TOGARAM1Q9Y4F4 1720 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 GLI3P10071 1580 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 EFCAB9A8MZ26 197 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 RGS10O43665 173 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 PLOD3O60568 738 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 PSIP1O75475 530 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 EPN2O95208 641 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 MLYCDO95822 493 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 PENKP01210 267 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 GSTT2P0CG29 244 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 GSTT2BP0CG30 244 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 TYMPP19971 482 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 LPOP22079 712 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 TCEA1P23193 301 aaKnown RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 PLA2G16P53816 162 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 HUNKP57058 714 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 SPIBQ01892 262 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 SPCS2Q15005 226 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 CES5AQ6NT32 575 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 Q6ZPB1 254 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 BTLAQ7Z6A9 289 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 DEFB128Q7Z7B8 93 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 STK40Q8N2I9 435 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 RNF175Q8N4F7 328 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 SLC13A3Q8WWT9 602 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 TFAP2CQ92754 450 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 ROPN1LQ96C74 230 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 RTP4Q96DX8 246 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 PPP1R2P1Q96PQ5 205 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 LRRC3Q9BY71 257 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 CRISPLD1Q9H336 500 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 LRTM1Q9HBL6 345 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 H2AFY2Q9P0M6 372 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 KLHL3Q9UH77 587 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 MAGEL2Q9UJ55 1249 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 UTS2RQ9UKP6 389 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 BOLA1Q9Y3E2 137 aa6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 ARIH1Q9Y4X5 557 aaPredicted RBP6.84□□□□□ -1.31
TGFBR3-207ENST00000525962 ITGB4P16144 1822 aa6.84□□□□□ -1.32
TGFBR3-207ENST00000525962 BRWD1Q9NSI6 2320 aa6.84□□□□□ -1.32
TGFBR3-207ENST00000525962 LOC100130705A0A1B0GUX0 176 aa6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 A0A1W2PP18 115 aa6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 PCP4L1A6NKN8 68 aa6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 OR2AG2A6NM03 316 aa6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 ZNF99A8MXY4 864 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 PER2O15055 1255 aa6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 FGF10O15520 208 aaPredicted RBP6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 FFAR2O15552 330 aa6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 IRAK2O43187 625 aa6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 UGT2B4P06133 528 aa6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 LCKP06239 509 aa6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 IFNA8P32881 189 aa6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 CTSKP43235 329 aa6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 CPT1AP50416 773 aa6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 YBX1P67809 324 aaKnown RBP6.83□□□□□ -1.32
TGFBR3-207ENST00000525962 CD47Q08722 323 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms