RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 FAM180BQ6P0A1 224 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 ZNF497Q6ZNH5 498 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 DENND5BQ6ZUT9 1274 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 CHST9Q7L1S5 443 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 ADAD2Q8NCV1 583 aaKnown RBP3.65□□□□□ -1.83
CD44-217ENST00000525348 OR2T12Q8NG77 320 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 POMGNT1Q8WZA1 660 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 SLC47A1Q96FL8 570 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 WBP1Q96G27 269 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 MPP4Q96JB8 637 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 NUDCD1Q96RS6 583 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 SH2D4AQ9H788 454 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 CHCHD3Q9NX63 227 aaKnown RBP3.65□□□□□ -1.83
CD44-217ENST00000525348 MIOSQ9NXC5 875 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 OGFRQ9NZT2 677 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 SESN1Q9Y6P5 492 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.65□□□□□ -1.83
CD44-217ENST00000525348 RAD50Q92878 1312 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 KIF13AQ9H1H9 1805 aa3.65□□□□□ -1.83
CD44-217ENST00000525348 A0A1B0GU03 582 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 TRIM64CA6NLI5 447 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 C15orf62A8K5M9 175 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 MAGEB17A8MXT2 336 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 MYO1GB0I1T2 1018 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 PLOD2O00469 737 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 NR5A2O00482 541 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 HTATSF1O43719 755 aaKnown RBP3.64□□□□□ -1.83
CD44-217ENST00000525348 GPC4O75487 556 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 BBOX1O75936 387 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 ACTN1P12814 892 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 LIFP15018 202 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 CKMT2P17540 419 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 PON1P27169 355 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 NMBRP28336 390 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 EPHA2P29317 976 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 ALDH1B1P30837 517 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 HOXA13P31271 388 aaPredicted RBP3.64□□□□□ -1.83
CD44-217ENST00000525348 ARL3P36405 182 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 MAP2K2P36507 400 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 HADHAP40939 763 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 CLK1P49759 484 aaKnown RBP3.64□□□□□ -1.83
CD44-217ENST00000525348 HSD17B4P51659 736 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 CDH8P55286 799 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 PMP22Q01453 160 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 MFAP5Q13361 173 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 TBC1D1Q86TI0 1168 aaPredicted RBP3.64□□□□□ -1.83
CD44-217ENST00000525348 SCYL3Q8IZE3 742 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 TAF4BQ92750 862 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 CCDC47Q96A33 483 aaKnown RBP3.64□□□□□ -1.83
CD44-217ENST00000525348 CFAP53Q96M91 514 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 EGLN1Q9GZT9 426 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 ALDH8A1Q9H2A2 487 aaPredicted RBP3.64□□□□□ -1.83
CD44-217ENST00000525348 DNAJC18Q9H819 358 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 SIX2Q9NPC8 291 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 KRT84Q9NSB2 600 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 SEPT11Q9NVA2 429 aaKnown RBP3.64□□□□□ -1.83
CD44-217ENST00000525348 UTP6Q9NYH9 597 aaKnown RBP3.64□□□□□ -1.83
CD44-217ENST00000525348 RABL2BQ9UNT1 228 aa3.64□□□□□ -1.83
CD44-217ENST00000525348 DDX49Q9Y6V7 483 aaKnown RBP3.64□□□□□ -1.83
CD44-217ENST00000525348 A0A0G2JLW4 131 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 A6NL46 340 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 BOLA2-SMG1P6H3BVE0 249 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 HMMRO75330 724 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 PTP4A3O75365 173 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 ZNF821O75541 412 aaPredicted RBP3.63□□□□□ -1.83
CD44-217ENST00000525348 NADKO95544 446 aaPredicted RBP3.63□□□□□ -1.83
CD44-217ENST00000525348 GH2P01242 217 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 LDHCP07864 332 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 ACP2P11117 423 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 ACADMP11310 421 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 HOXD10P28358 340 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 SUOXP51687 545 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 PRAMEP78395 509 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 WASHC5Q12768 1159 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 MAMLD1Q13495 774 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 IRF3Q14653 427 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 ZSCAN26Q16670 478 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 KIAA1644Q3SXP7 199 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 ALDH1L2Q3SY69 923 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 ASPRV1Q53RT3 343 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 ZC2HC1BQ5TFG8 222 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 CCDC30Q5VVM6 783 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 ALS2CLQ60I27 953 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 FAM109BQ6ICB4 259 aaPredicted RBP3.63□□□□□ -1.83
CD44-217ENST00000525348 KRT77Q7Z794 578 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 TICAM1Q8IUC6 712 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 PLD3Q8IV08 490 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 HSCBQ8IWL3 235 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 L3MBTL4Q8NA19 623 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 ZNF248Q8NDW4 579 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 MNS1Q8NEH6 495 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 DACH2Q96NX9 599 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 MOV10L1Q9BXT6 1211 aaKnown RBP3.63□□□□□ -1.83
CD44-217ENST00000525348 DENND2DQ9H6A0 471 aaPredicted RBP3.63□□□□□ -1.83
CD44-217ENST00000525348 ODF2LQ9ULJ1 636 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 NENFQ9UMX5 172 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 LYVE1Q9Y5Y7 322 aa3.63□□□□□ -1.83
CD44-217ENST00000525348 TSPOAP1O95153 1857 aa3.62□□□□□ -1.83
CD44-217ENST00000525348 F5H0A9 414 aaPredicted RBP3.62□□□□□ -1.83
CD44-217ENST00000525348 GPR137BO60478 399 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms