RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 MTHFSDQ2M296 383 aaKnown RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 USP41Q3LFD5 358 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 LDLRAP1Q5SW96 308 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 PIP5KL1Q5T9C9 394 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 VASNQ6EMK4 673 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 LAYNQ6UX15 382 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 ZNF600Q6ZNG1 722 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 ZBTB49Q6ZSB9 765 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 DOK3Q7L591 496 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 PIGWQ7Z7B1 504 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 PHLDB2Q86SQ0 1253 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 LDB1Q86U70 411 aaPredicted RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 TSPAN33Q86UF1 283 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 GPAT4Q86UL3 456 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 TPRA1Q86W33 373 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 ZDHHC13Q8IUH4 622 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 ARID3BQ8IVW6 561 aaPredicted RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 ZNF595Q8IYB9 648 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 SYNE4Q8N205 404 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 METTL25Q8N6Q8 603 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 AMER3Q8N944 861 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 ZNF565Q8N9K5 539 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 TP53I13Q8NBR0 393 aaPredicted RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 STKLD1Q8NE28 680 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 C17orf47Q8NEP4 570 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 CAGE1Q8TC20 777 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 TMEM171Q8WVE6 324 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 UBLCP1Q8WVY7 318 aaPredicted RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 OR1E3Q8WZA6 343 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 RIT1Q92963 219 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 SLCO4A1Q96BD0 722 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 SGK3Q96BR1 496 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 MOAP1Q96BY2 351 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 NXNL1Q96CM4 212 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 HSPA12BQ96MM6 686 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 RPRD1AQ96P16 312 aaPredicted RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 PANX2Q96RD6 677 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 SMC6Q96SB8 1091 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 C19orf43Q9BQ61 176 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 FAM213AQ9BRX8 229 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 FICDQ9BVA6 458 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 HDHD5Q9BXW7 423 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 NAPBQ9H115 298 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 RIOX1Q9H6W3 641 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 PSTPIP2Q9H939 334 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 FN3KRPQ9HA64 309 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 SDHAF3Q9NRP4 125 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 ASNSD1Q9NWL6 643 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 TRPM5Q9NZQ8 1165 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 DBF4Q9UBU7 674 aaPredicted RBP4.4□□□□□ -1.71
CD44-213ENST00000525209 DNAJB4Q9UDY4 337 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 STEAP1Q9UHE8 339 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 HACL1Q9UJ83 578 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 SBNO1A3KN83 1393 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 ZMYM3Q14202 1370 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 AATKQ6ZMQ8 1374 aa4.4□□□□□ -1.71
CD44-213ENST00000525209 CTTNBP2Q8WZ74 1663 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 A0A0G2JNJ9 132 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 A0A1B0GUL7 405 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 A0A1W2PQJ5 194 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 MACROD2A1Z1Q3 448 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 MAGEA13PA6NCF6 341 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 BTBD17A6NE02 478 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 OR6C75A6NL08 312 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 C4orf47A7E2U8 309 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 BECN2A8MW95 431 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 KIAA1324LA8MWY0 1029 aaPredicted RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 PRR23D1E9PI22 279 aaPredicted RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 TRIM77I1YAP6 450 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 MAGEB2O15479 319 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 OGG1O15527 345 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 AKR7A2O43488 359 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 DCXO43602 365 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 EXTL3O43909 919 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 CCNT1O60563 726 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 GPC4O75487 556 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 KRT36O76013 467 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 ZNF202O95125 648 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 C8AP07357 584 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 PRR23D2P0DMB1 279 aaPredicted RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 OR8G3PP0DMU2 310 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 TMEM225BP0DP42 221 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 PRPS2P11908 318 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 F3P13726 295 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 LBPP18428 481 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 UGT1A6P19224 532 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 NCF2P19878 526 aaPredicted RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 ANXA7P20073 488 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 EEF1B2P24534 225 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 TKTP29401 623 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 IGHMBP2P38935 993 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 SYKP43405 635 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 KIR2DL3P43628 341 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 ALDH7A1P49419 539 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 CCNHP51946 323 aaPredicted RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 RPL23AP62750 156 aaKnown RBP4.39□□□□□ -1.71
CD44-213ENST00000525209 SIRPAP78324 504 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 TGM3Q08188 693 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 TNK1Q13470 666 aa4.39□□□□□ -1.71
CD44-213ENST00000525209 DRP2Q13474 957 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms