RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CFAP20Q9Y6A4 193 aaKnown RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 LRP4O75096 1905 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 ASCC3Q8N3C0 2202 aaKnown RBP5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 DMDP11532 3685 aa5.28□□□□□ -1.56
HMGB1P40-201ENST00000525121 SCN8AQ9UQD0 1980 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 IGHV5-10-1A0A0J9YXX1 117 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZCWPW2A0A1B0GU75 182 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 A0A1W2PQM1 296 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 GSAPA4D1B5 854 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 PRR19A6NJB7 356 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 PLD2O14939 933 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 B4GAT1O43505 415 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SGTAO43765 313 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 VPS26AO75436 327 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SPAG6O75602 509 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 MPOP05164 745 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 ERVK-10P10266 1014 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 PKMP14618 531 aaKnown RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 BRAFP15056 766 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 IVDP26440 423 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 ARNTP27540 789 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 ATP5DP30049 168 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SHMT2P34897 504 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 CCNFP41002 786 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC1A2P43004 574 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 CAPZBP47756 277 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 ARCN1P48444 511 aaKnown RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 LSSP48449 732 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 RGS4P49798 205 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 LIMK2P53671 638 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 PLTPP55058 493 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 MRPS25P82663 173 aaKnown RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 GUCY2DQ02846 1103 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 MGAT5Q09328 741 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 CTBP1Q13363 440 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SQSTM1Q13501 440 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 FRG1Q14331 258 aaKnown RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SEMA3AQ14563 771 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 RTP5Q14D33 572 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 GLE1Q53GS7 698 aaKnown RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SNAP47Q5SQN1 464 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 HP1BP3Q5SSJ5 553 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 PLEKHS1Q5SXH7 462 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 NKAIN2Q5VXU1 208 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 DUPD1Q68J44 220 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 CAPRIN2Q6IMN6 1127 aaKnown RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 LRRC8EQ6NSJ5 796 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 IRGCQ6NXR0 463 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 UNC5DQ6UXZ4 953 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 UNC5AQ6ZN44 842 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 FAM129CQ86XR2 697 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 ANKMY2Q8IV38 441 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 DENND6AQ8IWF6 608 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 TBC1D21Q8IYX1 336 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC22A15Q8IZD6 547 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 KRT222Q8N1A0 295 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 FBXO39Q8N4B4 442 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 MMGT1Q8N4V1 131 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZBTB2Q8N680 514 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 FBXO36Q8NEA4 188 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SPDYE1Q8NFV5 336 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 CFAP61Q8NHU2 1237 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 MAGEC3Q8TD91 643 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 LPGAT1Q92604 370 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 KCNJ9Q92806 393 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 GATA6Q92908 595 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 CCDC97Q96F63 343 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 FCRL3Q96P31 734 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 TGM7Q96PF1 710 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 INSM2Q96T92 566 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 CD180Q99467 661 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 NUDT22Q9BRQ3 303 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 TRIM56Q9BRZ2 755 aaKnown RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 RAB11FIP5Q9BXF6 653 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 TBC1D10AQ9BXI6 508 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 PHACTR1Q9C0D0 580 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 P2RY12Q9H244 342 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 OR52A5Q9H2C5 316 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 ZNF106Q9H2Y7 1883 aaKnown RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SRMSQ9H3Y6 488 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SAYSD1Q9NPB0 183 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 FBXO6Q9NRD1 293 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 FAM114A2Q9NRY5 505 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 IL1RAPL1Q9NZN1 696 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SCHIP1Q9P0W5 487 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 PISDQ9UG56 409 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 KLHL3Q9UH77 587 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC24A2Q9UI40 661 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 TRMT6Q9UJA5 497 aaKnown RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 CORO1CQ9ULV4 474 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 SATB2Q9UPW6 733 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 TDRKHQ9Y2W6 561 aaKnown RBP5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 LOXL2Q9Y4K0 774 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 PCDHB11Q9Y5F2 797 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 PCDHGA8Q9Y5G5 932 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 ENTPD2Q9Y5L3 495 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 PRSS21Q9Y6M0 314 aa5.27□□□□□ -1.57
HMGB1P40-201ENST00000525121 MN1Q10571 1320 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P40-201ENST00000525121 SLC5A10A0PJK1 596 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms