RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ESX1Q8N693 406 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 EXD3Q8N9H8 876 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 OR4E2Q8NGC2 313 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.09■□□□□ 0.49
CAPN1-203ENST00000525013 PAK5Q9P286 719 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 BOD1L1Q8NFC6 3051 aa18.08■□□□□ 0.49
CAPN1-203ENST00000525013 TLCD2A6NGC4 264 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 ZNF891A8MT65 544 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-203ENST00000525013 KIAA0754O94854 1291 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 AP2A2O94973 939 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 DLGAP3O95886 979 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 FGGP02679 453 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 FAM87AP0C7U9 286 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 ZSCAN5DPP0CG00 497 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 PREPP48147 710 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 SEMA5AQ13591 1074 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 KCNAB1Q14722 419 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 SIX1Q15475 284 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-203ENST00000525013 C6orf15Q6UXA7 325 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-203ENST00000525013 GSTA5Q7RTV2 222 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 PPP1R3BQ86XI6 285 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 GLIS1Q8NBF1 620 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 GALNT6Q8NCL4 622 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 TRIM58Q8NG06 486 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 LCN9Q8WX39 176 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 HDAC10Q969S8 669 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 CD180Q99467 661 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 EFHD1Q9BUP0 239 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 OR52A5Q9H2C5 316 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 PDE7BQ9NP56 450 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 LNPEPQ9UIQ6 1025 aa18.08■□□□□ 0.48
CAPN1-203ENST00000525013 CEP104O60308 925 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 SPAG6O75602 509 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 EBLN1P0CF75 366 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 FGF5P12034 268 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 FOLR1P15328 257 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 POLR2CP19387 275 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-203ENST00000525013 ADRA1DP25100 572 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 PSMA3P25788 255 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 PDHA2P29803 388 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 FOXN2P32314 431 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 RPL22P35268 128 aaKnown RBP18.07■□□□□ 0.48
CAPN1-203ENST00000525013 NSG1P42857 185 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 CCZ1BP86790 482 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 CCZ1P86791 482 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-203ENST00000525013 PRKAA1Q13131 559 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 RPA4Q13156 261 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 TUBB3Q13509 450 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 ITIH4Q14624 930 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 TSTD2Q5T7W7 516 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 CYB5D1Q6P9G0 228 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 PHC3Q8NDX5 983 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 ACVR1CQ8NER5 493 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 OR13J1Q8NGT2 312 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 OR6P1Q8NGX9 317 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 MAIP1Q8WWC4 291 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 STAMBPL1Q96FJ0 436 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 SLC45A3Q96JT2 553 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 SLC41A2Q96JW4 573 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 TTC1Q99614 292 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 TLR10Q9BXR5 811 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 SRMSQ9H3Y6 488 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 CASS4Q9NQ75 786 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 SEMA5BQ9P283 1151 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 SLC2A6Q9UGQ3 507 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 IL17BQ9UHF5 180 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 RARRES3Q9UL19 164 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 DRG1Q9Y295 367 aaKnown RBP18.07■□□□□ 0.48
CAPN1-203ENST00000525013 PRSS21Q9Y6M0 314 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 RPS6KL1Q9Y6S9 549 aa18.07■□□□□ 0.48
CAPN1-203ENST00000525013 QSOX1O00391 747 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 NKX2-8O15522 239 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 GOT2P00505 430 aaKnown RBP18.06■□□□□ 0.48
CAPN1-203ENST00000525013 GSTM1P09488 218 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 PRKAR1AP10644 381 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 CXCR5P32302 372 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 STAT5AP42229 794 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 CD151P48509 253 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 HSD11B2P80365 405 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 GSTM4Q03013 218 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 MAP7Q14244 749 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 BRD3Q15059 726 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.06■□□□□ 0.48
CAPN1-203ENST00000525013 AFTPHQ6ULP2 937 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 CERS6Q6ZMG9 384 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 NLRP9Q7RTR0 991 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 KMT5CQ86Y97 462 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 ELMO1Q92556 727 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 TFGQ92734 400 aaPredicted RBP18.06■□□□□ 0.48
CAPN1-203ENST00000525013 ZNF778Q96MU6 729 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 RANBP9Q96S59 729 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 MVB12BQ9H7P6 319 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 ZKSCAN5Q9Y2L8 839 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 PPP2R2CQ9Y2T4 447 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 SEC16AO15027 2179 aa18.06■□□□□ 0.48
CAPN1-203ENST00000525013 GSAPA4D1B5 854 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 ZBTB11O95625 1053 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-203ENST00000525013 FTH1P02794 183 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 CCNYL3P0C7X3 344 aa18.05■□□□□ 0.48
CAPN1-203ENST00000525013 DLSTP36957 453 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms