RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 ATXN7L2Q5T6C5 722 aaPredicted RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 PEAR1Q5VY43 1037 aaPredicted RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 CES4AQ5XG92 561 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 SEL1L3Q68CR1 1132 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 EPGNQ6UW88 154 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 GDPD4Q6W3E5 623 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 MACC1Q6ZN28 852 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 RNF165Q6ZSG1 346 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 EFL1Q7Z2Z2 1120 aaKnown RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 LYSMD3Q7Z3D4 306 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 RAB44Q7Z6P3 723 aaPredicted RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 ADAMTSL2Q86TH1 951 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 ISCA2Q86U28 154 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 MTDHQ86UE4 582 aaKnown RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 OR2A12Q8NGT7 310 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 OR14C36Q8NHC7 312 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 RFWD2Q8NHY2 731 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 PIP4K2CQ8TBX8 421 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 MAGEC3Q8TD91 643 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 OR8D1Q8WZ84 308 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 KLK6Q92876 244 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 VOPP1Q96AW1 172 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 ARRDC3Q96B67 414 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 BIRC7Q96CA5 298 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 NXNL1Q96CM4 212 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 PTCD3Q96EY7 689 aaKnown RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 MAELQ96JY0 434 aaKnown RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 SCYL1Q96KG9 808 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 ATOH8Q96SQ7 321 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 HEPHQ9BQS7 1158 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 ERVK-6Q9BXR3 956 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 NUSAP1Q9BXS6 441 aaKnown RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 TM6SF2Q9BZW4 377 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 EBF2Q9HAK2 575 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 IL21RQ9HBE5 538 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 TMEM9BQ9NQ34 198 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 PFDN4Q9NQP4 134 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 TMEM45AQ9NWC5 275 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 HECAQ9UBI9 543 aaPredicted RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 TRMT6Q9UJA5 497 aaKnown RBP6.97□□□□□ -1.29
VPS11-201ENST00000524454 GNPTGQ9UJJ9 305 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 DCTN4Q9UJW0 460 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 SLC6A14Q9UN76 642 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 NCKAP1Q9Y2A7 1128 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 MED16Q9Y2X0 877 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 KCTD3Q9Y597 815 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 CAPN7Q9Y6W3 813 aa6.97□□□□□ -1.29
VPS11-201ENST00000524454 GLYATL1P3A0A0U1RQE8 302 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 C1orf232A0A0U1RR37 186 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 A0A1B0GVT2 93 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 CCDC78A2IDD5 438 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 ERVH48-1M5A8F1 160 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 KPNA3O00505 521 aaPredicted RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 FCHO1O14526 889 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 GAPDHSO14556 408 aaPredicted RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 WNT9AO14904 365 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 GIPC1O14908 333 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 KPNA5O15131 536 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 CAPN5O15484 640 aaPredicted RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 MGRN1O60291 552 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 MAGEC1O60732 1142 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 VPS4BO75351 444 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 AP2A2O94973 939 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 PRAMEF1O95521 474 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 PRNPP04156 253 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 IGHV4-34P06331 123 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 FGF4P08620 206 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 GSTM1P09488 218 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 T-ENOLP0DO92 83 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 NQO1P15559 274 aaKnown RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 TFEBP19484 476 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 C5AR1P21730 350 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 ACRV1P26436 265 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 MAT2AP31153 395 aaKnown RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 HNF1BP35680 557 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 NSG1P42857 185 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 MRPL19P49406 292 aaKnown RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 CSNK1EP49674 416 aaKnown RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 RGS4P49798 205 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 NAGLUP54802 743 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 ADPRHP54922 357 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 TIAL1Q01085 375 aaKnown RBP eCLIP6.96□□□□□ -1.3
VPS11-201ENST00000524454 GSTM4Q03013 218 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 PPARDQ03181 441 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 GRIK2Q13002 908 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 TUBB3Q13509 450 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 CSHL1Q14406 222 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 SEMA3AQ14563 771 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 HERC3Q15034 1050 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 DUOXA1Q1HG43 343 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 TTLL9Q3SXZ7 439 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 DNAL1Q4LDG9 190 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 ZNF789Q5FWF6 425 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 ARL13AQ5H913 290 aaPredicted RBP6.96□□□□□ -1.3
VPS11-201ENST00000524454 LRRC73Q5JTD7 316 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 WDR45BQ5MNZ6 344 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 AGBL4Q5VU57 503 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 KIAA0895LQ68EN5 471 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 SLC23A3Q6PIS1 610 aa6.96□□□□□ -1.3
VPS11-201ENST00000524454 DPY19L3Q6ZPD9 716 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms