RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.02■□□□□ -0
MRPS28-209ENST00000522987 DNMT3AQ9Y6K1 912 aaPredicted RBP15.02■□□□□ -0
MRPS28-209ENST00000522987 SPTBN1Q01082 2364 aaKnown RBP15.02□□□□□ -0.01
MRPS28-209ENST00000522987 USP9YO00507 2555 aaPredicted RBP15.01□□□□□ -0.01
MRPS28-209ENST00000522987 CCDC66A2RUB6 948 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 C2orf81A6NN90 581 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 TMEM150CB9EJG8 249 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 PGDP52209 483 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 OTUD4Q01804 1114 aaKnown RBP15.01□□□□□ -0.01
MRPS28-209ENST00000522987 RAPSNQ13702 412 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 TAF1AQ15573 450 aaPredicted RBP15.01□□□□□ -0.01
MRPS28-209ENST00000522987 PTCHD3Q3KNS1 767 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 TMTC4Q5T4D3 741 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 AADACL2Q6P093 401 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 BBS12Q6ZW61 710 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 SYVN1Q86TM6 617 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 KMT5CQ86Y97 462 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 APLFQ8IW19 511 aaPredicted RBP15.01□□□□□ -0.01
MRPS28-209ENST00000522987 EFCAB3Q8N7B9 438 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 ENDOVQ8N8Q3 282 aaKnown RBP15.01□□□□□ -0.01
MRPS28-209ENST00000522987 CCDC110Q8TBZ0 833 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 ACTL9Q8TC94 416 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 CD180Q99467 661 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 VAT1Q99536 393 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 ING2Q9H160 280 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 XKR8Q9H6D3 395 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 MAP10Q9P2G4 905 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 TRHDEQ9UKU6 1024 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 ACSL5Q9ULC5 683 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 INTUQ9ULD6 942 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 SPTAN1Q13813 2472 aaKnown RBP15.01□□□□□ -0.01
MRPS28-209ENST00000522987 SPENQ96T58 3664 aaKnown RBP15.01□□□□□ -0.01
MRPS28-209ENST00000522987 ANKRD12Q6UB98 2062 aa15.01□□□□□ -0.01
MRPS28-209ENST00000522987 CCDC78A2IDD5 438 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 HACD1B0YJ81 288 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 ZNF185O15231 689 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 KCNN4O15554 427 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 ANXA9O76027 345 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 ST6GAL1P15907 406 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 PREPP48147 710 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 XIAPP98170 497 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 PRKAA1Q13131 559 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 PRKG2Q13237 762 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 LAMB3Q13751 1172 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 ANKRD20A2Q5SQ80 823 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 PLEKHS1Q5SXH7 462 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 ANKRD20A1Q5TYW2 823 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 ANKRD20A3Q5VUR7 823 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 ITPRIPL1Q6GPH6 555 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 CNGA4Q8IV77 575 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 TAB3Q8N5C8 712 aaPredicted RBP15□□□□□ -0.01
MRPS28-209ENST00000522987 OR1L3Q8NH93 324 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 CPT1CQ8TCG5 803 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 DTX3LQ8TDB6 740 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 LCN9Q8WX39 176 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 RBM41Q96IZ5 413 aaKnown RBP15□□□□□ -0.01
MRPS28-209ENST00000522987 FCRL4Q96PJ5 515 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 HGH1Q9BTY7 390 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 GPR87Q9BY21 358 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 SRMSQ9H3Y6 488 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 TSPY26PQ9H489 355 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 LRRC4CQ9HCJ2 640 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 POMT2Q9UKY4 750 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 SNX7Q9UNH6 387 aa15□□□□□ -0.01
MRPS28-209ENST00000522987 MEN1O00255 615 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 BTN3A3O00478 584 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 BTN3A1O00481 513 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 VPS4BO75351 444 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 KLK3P07288 261 aaPredicted RBP14.99□□□□□ -0.01
MRPS28-209ENST00000522987 CTNNA2P26232 953 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 PDHA2P29803 388 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 ADRA1AP35348 466 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 CD97P48960 835 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 EIF3EP60228 445 aaKnown RBP14.99□□□□□ -0.01
MRPS28-209ENST00000522987 BRD3Q15059 726 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 TCEAL1Q15170 157 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 BCL7AQ4VC05 210 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 ZRANB3Q5FWF4 1079 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 CAPRIN2Q6IMN6 1127 aaKnown RBP14.99□□□□□ -0.01
MRPS28-209ENST00000522987 DARS2Q6PI48 645 aaKnown RBP14.99□□□□□ -0.01
MRPS28-209ENST00000522987 RANBP10Q6VN20 620 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 TRIM73Q86UV7 250 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 NXPE1Q8N323 547 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 HM13Q8TCT9 377 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 DNAJC1Q96KC8 554 aaKnown RBP14.99□□□□□ -0.01
MRPS28-209ENST00000522987 SLC7A5P2Q9GIP4 190 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 PIH1D1Q9NWS0 290 aaKnown RBP14.99□□□□□ -0.01
MRPS28-209ENST00000522987 VPS4AQ9UN37 437 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 BTRCQ9Y297 605 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 PCDHA13Q9Y5I0 950 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 COLEC10Q9Y6Z7 277 aa14.99□□□□□ -0.01
MRPS28-209ENST00000522987 NUP210LQ5VU65 1888 aa14.98□□□□□ -0.01
MRPS28-209ENST00000522987 C5orf60A6NFR6 353 aa14.98□□□□□ -0.01
MRPS28-209ENST00000522987 APOC4-APOC2K7ER74 178 aa14.98□□□□□ -0.01
MRPS28-209ENST00000522987 AGFG2O95081 481 aa14.98□□□□□ -0.01
MRPS28-209ENST00000522987 APOC2P02655 101 aa14.98□□□□□ -0.01
MRPS28-209ENST00000522987 RBP3P10745 1247 aa14.98□□□□□ -0.01
MRPS28-209ENST00000522987 RALBP11234 206 aa14.98□□□□□ -0.01
MRPS28-209ENST00000522987 TPH1P17752 444 aa14.98□□□□□ -0.01
MRPS28-209ENST00000522987 ITGALP20701 1170 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms