RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 MMP20O60882 483 aa16.52■□□□□ 0.23
SREK1-212ENST00000522912 VPS4BO75351 444 aa16.52■□□□□ 0.23
SREK1-212ENST00000522912 KATNA1O75449 491 aa16.52■□□□□ 0.23
SREK1-212ENST00000522912 CHEK2O96017 543 aa16.52■□□□□ 0.23
SREK1-212ENST00000522912 CAPN1P07384 714 aa16.52■□□□□ 0.23
SREK1-212ENST00000522912 C6P13671 934 aa16.52■□□□□ 0.23
SREK1-212ENST00000522912 PSMD8P48556 350 aa16.52■□□□□ 0.23
SREK1-212ENST00000522912 ACTR3P61158 418 aa16.52■□□□□ 0.23
SREK1-212ENST00000522912 TMEM115Q12893 351 aaPredicted RBP16.52■□□□□ 0.23
SREK1-212ENST00000522912 C1orf146Q5VVC0 180 aa16.52■□□□□ 0.23
SREK1-212ENST00000522912 ERN2Q76MJ5 926 aaKnown RBP16.52■□□□□ 0.23
SREK1-212ENST00000522912 FUNDC1Q8IVP5 155 aa16.52■□□□□ 0.23
SREK1-212ENST00000522912 RAVER1Q8IY67 606 aaKnown RBP16.52■□□□□ 0.23
SREK1-212ENST00000522912 OPTCQ9UBM4 332 aa16.52■□□□□ 0.23
SREK1-212ENST00000522912 ZFC3H1O60293 1989 aaKnown RBP16.51■□□□□ 0.23
SREK1-212ENST00000522912 GFYI3L273 518 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 K7EPI3 171 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 FBP2O00757 339 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 KPNA5O15131 536 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 PSMG1O95456 288 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 OTCP00480 354 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 LMNAP02545 664 aaKnown RBP16.51■□□□□ 0.23
SREK1-212ENST00000522912 FTH1P02794 183 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 C8GP07360 202 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 ANXA5P08758 320 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 ARL1P40616 181 aaPredicted RBP16.51■□□□□ 0.23
SREK1-212ENST00000522912 SOX9P48436 509 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 HTR6P50406 440 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 CCNG1P51959 295 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 ZXDCQ2QGD7 858 aaPredicted RBP16.51■□□□□ 0.23
SREK1-212ENST00000522912 ITPRIPL2Q3MIP1 535 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 TMEM52BQ4KMG9 183 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 CDKL4Q5MAI5 379 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 C16orf89Q6UX73 402 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 HPS6Q86YV9 775 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 FBXW8Q8N3Y1 598 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 METTL6Q8TCB7 284 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 SKA2Q8WVK7 121 aaPredicted RBP16.51■□□□□ 0.23
SREK1-212ENST00000522912 ATP6V1E2Q96A05 226 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 TRMT61BQ9BVS5 477 aaKnown RBP16.51■□□□□ 0.23
SREK1-212ENST00000522912 PARVBQ9HBI1 364 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 DYRK4Q9NR20 520 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 ARL15Q9NXU5 204 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 FAM8A1Q9UBU6 413 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 ATG2BQ96BY7 2078 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 TICRRQ7Z2Z1 1910 aa16.51■□□□□ 0.23
SREK1-212ENST00000522912 TSPAN6O43657 245 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 SLCO2B1O94956 709 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 APODP05090 189 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 ENO2P09104 434 aaPredicted RBP16.5■□□□□ 0.23
SREK1-212ENST00000522912 P2RY2P41231 377 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 DPP6P42658 865 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 WASP42768 502 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 ACADVLP49748 655 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 MTTPP55157 894 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 STX1BP61266 288 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 ART3Q13508 389 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 MAPRE2Q15555 327 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 ZRSR2Q15696 482 aaKnown RBP16.5■□□□□ 0.23
SREK1-212ENST00000522912 KIF19Q2TAC6 998 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 C6orf163Q5TEZ5 329 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 OGFOD2Q6N063 350 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 MILR1Q7Z6M3 343 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 DSG4Q86SJ6 1040 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 RASGRP3Q8IV61 690 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 ASZ1Q8WWH4 475 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 NUS1Q96E22 293 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 PACSIN3Q9UKS6 424 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 ANGPTL3Q9Y5C1 460 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 STON1Q9Y6Q2 735 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 CKAP5Q14008 2032 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 C1QTNF3-AMACRE9PGA6 284 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 QSOX1O00391 747 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 SNRPB2P08579 225 aaKnown RBP16.5■□□□□ 0.23
SREK1-212ENST00000522912 GNAZP19086 355 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 PRLHRP49683 370 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 ERFP50548 548 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 DIO3P55073 304 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 NME5P56597 212 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 CDKL1Q00532 357 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 CNTN1Q12860 1018 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 RCN1Q15293 331 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 REP15Q6BDI9 236 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 METTL2BQ6P1Q9 378 aaKnown RBP16.5■□□□□ 0.23
SREK1-212ENST00000522912 TMEM220Q6QAJ8 160 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 Q6ZSR9 355 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 NEK10Q6ZWH5 1172 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 ZNF765Q7L2R6 523 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 TRIM74Q86UV6 250 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 NLRP8Q86W28 1048 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 PGAM4Q8N0Y7 254 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 LILRA3Q8N6C8 439 aaPredicted RBP16.5■□□□□ 0.23
SREK1-212ENST00000522912 CFAP61Q8NHU2 1237 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 ABHD8Q96I13 439 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 HDAC8Q9BY41 377 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 MRPL1Q9BYD6 325 aaKnown RBP16.5■□□□□ 0.23
SREK1-212ENST00000522912 WDR41Q9HAD4 459 aa16.5■□□□□ 0.23
SREK1-212ENST00000522912 PRPF19Q9UMS4 504 aaKnown RBP16.5■□□□□ 0.23
SREK1-212ENST00000522912 KRT87PA6NCN2 255 aa16.49■□□□□ 0.23
SREK1-212ENST00000522912 CCDC85CA6NKD9 419 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms